Top 10 genes with highest correlation to Rv3749c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2287/yjcE | (cc=0.8532) | info on Rv2287/yjcE |
| Rv1913/- | (cc=0.8224) | info on Rv1913/- |
| Rv0293c/- | (cc=0.7675) | info on Rv0293c/- |
| Rv1356c/- | (cc=0.7432) | info on Rv1356c/- |
| Rv0182c/sigG | (cc=0.7014) | info on Rv0182c/sigG |
| Rv3812/PE_PGRS62 | (cc=0.6826) | info on Rv3812/PE_PGRS62 |
| Rv2668/- | (cc=0.6646) | info on Rv2668/- |
| Rv0187/- | (cc=0.6288) | info on Rv0187/- |
| Rv3697c/vapC48 | (cc=0.6188) | info on Rv3697c/vapC48 |
| Rv1366/- | (cc=0.6056) | info on Rv1366/- |
Correlation of Rv3749c/- with Rv0182c/sigG
Normalized LFCs for Rv3749c/-:
(description and provenance of datasets)
| Rv3749c/- | Rv0182c/sigG | |
| Fe_supp_jason_reseq | 0.253 | -0.504 |
| low_pH_jason_reseq | -0.602 | -0.105 |
| NO_jason_reseq | 0.026 | 0.116 |
| B6_jason_reseq | 0.466 | 0.824 |
| MHCII_jason_reseq | 0.688 | -0.325 |
| Isoniazid02 | -0.227 | -0.579 |
| Rifampicin4 | 0.062 | -0.769 |
| Ethambutol3 | 0.136 | 0.495 |
| Meropenem3 | -0.904 | -0.231 |
| Vancomycin16 | -0.464 | -0.21 |
| Rv2680_day32 | -0.008 | 1.17 |
| H37Rv_KO_MarP | 0.429 | 0.603 |
| hypoxia_3wks | -0.1 | -0.498 |
| hypoxia_6wks | -0.098 | -0.067 |
| glycerol | -2.336 | -0.572 |
| cholesterol | -1.456 | -0.802 |
| AJ | 0.225 | -0.425 |
| Bibs02 | -0.535 | -0.984 |
| Bibs02c | 0.779 | -0.255 |
| BL6 | -0.411 | 0.64 |
| BL6a | 0.532 | -0.145 |
| BXD01 | -0.171 | 0.017 |
| BXD010 | 0.558 | 0.165 |
| BXD011 | -0.294 | 1.856 |
| BXD03 | -0.054 | 0.301 |
| BXD04 | -0.348 | 0.297 |
| BXD05 | 0.359 | -0.218 |
| BXD06 | -0.489 | 0.363 |
| BXD07 | -0.021 | -0.018 |
| BXD08 | -0.206 | -0.216 |
| BXD09 | -0.101 | -0.28 |
| CAST | 0.354 | 0.224 |
| CCcont | -0.373 | -0.707 |
| DS01 | -0.101 | -0.323 |
| DS02 | -0.487 | -0.706 |
| DS04 | -0.521 | -1.074 |
| DS0c | 0.193 | -0.079 |
| GP01 | 1.065 | -0.13 |
| GP02 | -0.271 | 1.742 |
| GP0c | -0.257 | 0.222 |
| NOD | 0.716 | -0.264 |
| NZO | 0.077 | 0.035 |
| PWK | 0.175 | -0.19 |
| H37Rv_KO_CtpC | -0.755 | -0.112 |
| H37Rv_KO_CtpD | -0.643 | 1.372 |
| H37Rv_KO_Rv1272 | -0.229 | 0.348 |
| H37Rv_KO_SugABC | -0.009 | -1.435 |
| H37Rv_KO_MbtN | -1.433 | -0.366 |
| Trans05 | -0.542 | -0.159 |
| macrophage_unactivated | -1.386 | -1.212 |
| IL1 | -5.09 | -2.758 |
| Rapamycin | -4.944 | -3.658 |
| Tcell | 2.366 | 1.531 |
| GMCSF | -4.267 | -2.492 |
| IFNab | -4.734 | -2.769 |
| IFNg | -4.479 | -2.929 |
| IFNg_GMCSF1 | -5.144 | -3.397 |
| Rv1432_day32 | 0.077 | 2.179 |
| Rv1565c_day32 | 0.18 | 0.292 |
| secA2_input | -0.941 | 0.344 |
| delta_Rv3594 | -0.393 | -0.895 |
| delta_Rv3717 | -0.339 | -0.364 |
| delta_Rv3811 | -0.082 | -0.332 |
| delta_Rv0954 | 0.141 | 0.084 |
| PonA1 | -0.029 | 0.042 |
| EccD1_KO | -0.428 | -0.079 |
| EspI_KO | -0.034 | -0.123 |
| PE35_KO | -0.604 | -0.426 |
| PPE68_KO | -0.877 | -0.32 |
| glycerol2 | 0.901 | -0.677 |
| lignocerate | 0.793 | -0.947 |
| oleate | 0.906 | -1.34 |
| phosphatidylcholine | 1.018 | -0.569 |
| acetate | 0.318 | -0.903 |
| glucAc | 0.22 | -0.661 |
| Rv0950ko | 0.356 | 0.066 |
| Rv1096ko | 0.425 | 0.087 |
| Rv3684ko | -0.016 | -0.2 |
| delta_otsA_trehalose | 1.092 | -0.977 |