Top 10 genes with highest correlation to Rv3741c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1711/- | (cc=0.5046) | info on Rv1711/- |
| Rv3905c/esxF | (cc=0.4942) | info on Rv3905c/esxF |
| Rv0757/phoP | (cc=0.4652) | info on Rv0757/phoP |
| Rv2310/- | (cc=0.4575) | info on Rv2310/- |
| Rv3748/- | (cc=0.4514) | info on Rv3748/- |
| Rv2581c/- | (cc=0.4504) | info on Rv2581c/- |
| Rv0262c/aac | (cc=0.4295) | info on Rv0262c/aac |
| Rv3175/- | (cc=0.4288) | info on Rv3175/- |
| Rv2548A/- | (cc=0.4252) | info on Rv2548A/- |
| Rv0943c/- | (cc=0.4173) | info on Rv0943c/- |
Correlation of Rv3741c/- with Rv3905c/esxF
Normalized LFCs for Rv3741c/-:
(description and provenance of datasets)
| Rv3741c/- | Rv3905c/esxF | |
| Fe_supp_jason_reseq | 0.341 | 0.022 |
| low_pH_jason_reseq | -0.241 | -0.184 |
| NO_jason_reseq | -0.801 | -0.753 |
| B6_jason_reseq | 0.089 | 0.239 |
| MHCII_jason_reseq | -0.455 | -0.027 |
| Isoniazid02 | 0.079 | -0.787 |
| Rifampicin4 | 0.092 | 0.295 |
| Ethambutol3 | 1.434 | 1.584 |
| Meropenem3 | -0.05 | -0.083 |
| Vancomycin16 | 0.196 | -0.172 |
| Rv2680_day32 | 0.399 | 0.57 |
| H37Rv_KO_MarP | 0.114 | -0.072 |
| hypoxia_3wks | -0.439 | -0.463 |
| hypoxia_6wks | 0.301 | -0.645 |
| glycerol | -0.407 | -0.926 |
| cholesterol | 0.039 | -0.242 |
| AJ | -0.113 | -0.516 |
| Bibs02 | -0.592 | -1.208 |
| Bibs02c | -0.696 | -0.15 |
| BL6 | 0.025 | -0.121 |
| BL6a | -0.027 | -1.055 |
| BXD01 | -0.169 | -0.465 |
| BXD010 | -0.475 | 0.033 |
| BXD011 | 0.018 | -0.624 |
| BXD03 | -0.228 | -1.1 |
| BXD04 | 0.364 | 0.223 |
| BXD05 | 0.483 | -0.906 |
| BXD06 | -0.037 | -0.148 |
| BXD07 | 0.4 | -0.514 |
| BXD08 | -0.018 | -0.026 |
| BXD09 | 0.324 | -0.542 |
| CAST | -0.445 | -0.561 |
| CCcont | 0.303 | -0.439 |
| DS01 | 0.505 | 0.046 |
| DS02 | 0.03 | -0.364 |
| DS04 | -0.164 | -0.038 |
| DS0c | -0.509 | -0.413 |
| GP01 | -0.973 | 0.275 |
| GP02 | -0.626 | -0.234 |
| GP0c | -0.942 | -0.665 |
| NOD | -0.967 | -0.68 |
| NZO | -1.263 | 0.253 |
| PWK | -1.475 | -0.335 |
| H37Rv_KO_CtpC | 0.011 | 0.099 |
| H37Rv_KO_CtpD | -0.107 | -0.362 |
| H37Rv_KO_Rv1272 | -1.813 | -1.661 |
| H37Rv_KO_SugABC | -0.184 | -1.017 |
| H37Rv_KO_MbtN | 0.232 | -0.382 |
| Trans05 | -0.536 | -0.816 |
| macrophage_unactivated | -0.076 | 0.205 |
| IL1 | 0.184 | 0.193 |
| Rapamycin | 0.675 | -0.393 |
| Tcell | -0.026 | -0.398 |
| GMCSF | -0.127 | 0.562 |
| IFNab | 0.478 | -0.49 |
| IFNg | -0.521 | 0.147 |
| IFNg_GMCSF1 | 0.05 | -0.562 |
| Rv1432_day32 | 0.872 | 0.871 |
| Rv1565c_day32 | -0.362 | 0.453 |
| secA2_input | 0.302 | -1.467 |
| delta_Rv3594 | -2.14 | -1.135 |
| delta_Rv3717 | -1.552 | -1.791 |
| delta_Rv3811 | -0.669 | -0.818 |
| delta_Rv0954 | -1.243 | -1.417 |
| PonA1 | -0.21 | 0.19 |
| EccD1_KO | 1.006 | -0.592 |
| EspI_KO | 0.707 | 0.807 |
| PE35_KO | 0.117 | -0.77 |
| PPE68_KO | 0.339 | -1.011 |
| glycerol2 | 0.39 | 0.321 |
| lignocerate | 0.553 | 0.395 |
| oleate | 0.323 | -0.096 |
| phosphatidylcholine | 0.147 | -0.256 |
| acetate | 0.407 | 1.209 |
| glucAc | 0.021 | 0.485 |
| Rv0950ko | 1.273 | -0.057 |
| Rv1096ko | 0.492 | 0.458 |
| Rv3684ko | 1.601 | 0.498 |
| delta_otsA_trehalose | -0.527 | -0.267 |