Top 10 genes with highest correlation to Rv3741c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1711/- | (cc=0.5046) | info on Rv1711/- |
| Rv3905c/esxF | (cc=0.4942) | info on Rv3905c/esxF |
| Rv0757/phoP | (cc=0.4652) | info on Rv0757/phoP |
| Rv2310/- | (cc=0.4575) | info on Rv2310/- |
| Rv3748/- | (cc=0.4514) | info on Rv3748/- |
| Rv2581c/- | (cc=0.4504) | info on Rv2581c/- |
| Rv0262c/aac | (cc=0.4295) | info on Rv0262c/aac |
| Rv3175/- | (cc=0.4288) | info on Rv3175/- |
| Rv2548A/- | (cc=0.4252) | info on Rv2548A/- |
| Rv0943c/- | (cc=0.4173) | info on Rv0943c/- |
Correlation of Rv3741c/- with Rv0757/phoP
Normalized LFCs for Rv3741c/-:
(description and provenance of datasets)
| Rv3741c/- | Rv0757/phoP | |
| Fe_supp_jason_reseq | 0.341 | 3.743 |
| low_pH_jason_reseq | -0.241 | 2.056 |
| NO_jason_reseq | -0.801 | -3.04 |
| B6_jason_reseq | 0.089 | -0.237 |
| MHCII_jason_reseq | -0.455 | -0.839 |
| Isoniazid02 | 0.079 | -2.642 |
| Rifampicin4 | 0.092 | -2.957 |
| Ethambutol3 | 1.434 | 0.242 |
| Meropenem3 | -0.05 | 0.513 |
| Vancomycin16 | 0.196 | -1.345 |
| Rv2680_day32 | 0.399 | 2.066 |
| H37Rv_KO_MarP | 0.114 | 3.807 |
| hypoxia_3wks | -0.439 | -2.628 |
| hypoxia_6wks | 0.301 | -2.76 |
| glycerol | -0.407 | -6.0 |
| cholesterol | 0.039 | -4.916 |
| AJ | -0.113 | -6.0 |
| Bibs02 | -0.592 | -4.225 |
| Bibs02c | -0.696 | -5.058 |
| BL6 | 0.025 | -4.37 |
| BL6a | -0.027 | -5.384 |
| BXD01 | -0.169 | -4.551 |
| BXD010 | -0.475 | -4.347 |
| BXD011 | 0.018 | -3.528 |
| BXD03 | -0.228 | -4.724 |
| BXD04 | 0.364 | -4.321 |
| BXD05 | 0.483 | -4.702 |
| BXD06 | -0.037 | -4.664 |
| BXD07 | 0.4 | -4.838 |
| BXD08 | -0.018 | -4.647 |
| BXD09 | 0.324 | -4.91 |
| CAST | -0.445 | -6.0 |
| CCcont | 0.303 | -0.89 |
| DS01 | 0.505 | -6.0 |
| DS02 | 0.03 | -5.026 |
| DS04 | -0.164 | -5.373 |
| DS0c | -0.509 | -4.737 |
| GP01 | -0.973 | -3.45 |
| GP02 | -0.626 | -2.907 |
| GP0c | -0.942 | -3.904 |
| NOD | -0.967 | -4.535 |
| NZO | -1.263 | -6.0 |
| PWK | -1.475 | -5.89 |
| H37Rv_KO_CtpC | 0.011 | -4.499 |
| H37Rv_KO_CtpD | -0.107 | -3.111 |
| H37Rv_KO_Rv1272 | -1.813 | -4.54 |
| H37Rv_KO_SugABC | -0.184 | -3.362 |
| H37Rv_KO_MbtN | 0.232 | -2.454 |
| Trans05 | -0.536 | -4.206 |
| macrophage_unactivated | -0.076 | -1.96 |
| IL1 | 0.184 | -1.842 |
| Rapamycin | 0.675 | -1.274 |
| Tcell | -0.026 | -1.678 |
| GMCSF | -0.127 | -2.64 |
| IFNab | 0.478 | -3.023 |
| IFNg | -0.521 | -2.673 |
| IFNg_GMCSF1 | 0.05 | -3.142 |
| Rv1432_day32 | 0.872 | 0.458 |
| Rv1565c_day32 | -0.362 | 1.579 |
| secA2_input | 0.302 | -0.238 |
| delta_Rv3594 | -2.14 | -6.0 |
| delta_Rv3717 | -1.552 | -5.163 |
| delta_Rv3811 | -0.669 | -6.0 |
| delta_Rv0954 | -1.243 | -1.579 |
| PonA1 | -0.21 | -0.548 |
| EccD1_KO | 1.006 | -1.174 |
| EspI_KO | 0.707 | -0.416 |
| PE35_KO | 0.117 | 2.173 |
| PPE68_KO | 0.339 | 1.507 |
| glycerol2 | 0.39 | 0.193 |
| lignocerate | 0.553 | 0.0 |
| oleate | 0.323 | 2.935 |
| phosphatidylcholine | 0.147 | 6.0 |
| acetate | 0.407 | 0.0 |
| glucAc | 0.021 | 0.272 |
| Rv0950ko | 1.273 | 0.299 |
| Rv1096ko | 0.492 | 0.0 |
| Rv3684ko | 1.601 | 0.164 |
| delta_otsA_trehalose | -0.527 | -2.245 |