Top 10 genes with highest correlation to Rv3731/ligC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3538/- | (cc=0.5859) | info on Rv3538/- |
| Rv3506/fadD17 | (cc=0.5413) | info on Rv3506/fadD17 |
| Rv0560c/- | (cc=0.536) | info on Rv0560c/- |
| Rv3903c/- | (cc=0.5198) | info on Rv3903c/- |
| Rv2826c/- | (cc=0.5121) | info on Rv2826c/- |
| Rv0089/- | (cc=0.5036) | info on Rv0089/- |
| Rv1070c/echA8 | (cc=0.4987) | info on Rv1070c/echA8 |
| Rv0758/phoR | (cc=0.4883) | info on Rv0758/phoR |
| Rv2625c/- | (cc=0.4853) | info on Rv2625c/- |
| Rv0984/moaB2 | (cc=0.4823) | info on Rv0984/moaB2 |
Correlation of Rv3731/ligC with Rv0984/moaB2
Normalized LFCs for Rv3731/ligC:
(description and provenance of datasets)
| Rv3731/ligC | Rv0984/moaB2 | |
| Fe_supp_jason_reseq | -0.142 | 2.846 |
| low_pH_jason_reseq | 0.313 | -0.428 |
| NO_jason_reseq | -0.903 | 0.0 |
| B6_jason_reseq | -0.138 | 1.747 |
| MHCII_jason_reseq | 0.414 | 1.01 |
| Isoniazid02 | -0.073 | 0.298 |
| Rifampicin4 | -0.328 | -0.152 |
| Ethambutol3 | 1.025 | -0.098 |
| Meropenem3 | 0.27 | 0.41 |
| Vancomycin16 | 0.016 | -0.021 |
| Rv2680_day32 | 0.331 | 1.149 |
| H37Rv_KO_MarP | 0.103 | 0.793 |
| hypoxia_3wks | 0.024 | 0.411 |
| hypoxia_6wks | -0.223 | -0.071 |
| glycerol | -0.418 | 0.503 |
| cholesterol | -0.621 | -0.114 |
| AJ | -0.338 | -0.044 |
| Bibs02 | 0.019 | 0.181 |
| Bibs02c | 0.464 | -0.52 |
| BL6 | 0.034 | -0.782 |
| BL6a | 0.26 | -0.903 |
| BXD01 | -0.614 | -0.844 |
| BXD010 | -0.57 | -1.868 |
| BXD011 | 0.201 | -1.407 |
| BXD03 | 0.082 | -1.531 |
| BXD04 | 0.03 | -1.169 |
| BXD05 | -0.449 | -1.475 |
| BXD06 | -0.184 | -1.463 |
| BXD07 | -0.468 | -1.256 |
| BXD08 | -0.076 | -1.544 |
| BXD09 | -0.378 | -1.296 |
| CAST | -0.487 | -0.15 |
| CCcont | -0.463 | -1.719 |
| DS01 | 0.228 | -0.352 |
| DS02 | 0.14 | 0.113 |
| DS04 | 0.034 | 0.114 |
| DS0c | 0.438 | 0.203 |
| GP01 | 0.108 | -1.833 |
| GP02 | 0.826 | 0.673 |
| GP0c | 0.209 | -1.831 |
| NOD | -0.381 | 0.104 |
| NZO | -0.405 | -0.998 |
| PWK | -0.027 | -0.558 |
| H37Rv_KO_CtpC | 0.141 | -0.693 |
| H37Rv_KO_CtpD | -0.816 | -3.93 |
| H37Rv_KO_Rv1272 | 0.297 | -0.317 |
| H37Rv_KO_SugABC | -0.479 | -2.356 |
| H37Rv_KO_MbtN | 0.921 | 0.035 |
| Trans05 | -0.449 | -1.69 |
| macrophage_unactivated | -1.206 | -5.3 |
| IL1 | -0.427 | -4.663 |
| Rapamycin | -0.239 | -3.652 |
| Tcell | -0.89 | -4.493 |
| GMCSF | -0.053 | -3.44 |
| IFNab | -0.662 | -5.424 |
| IFNg | -0.863 | -4.525 |
| IFNg_GMCSF1 | -0.616 | -5.455 |
| Rv1432_day32 | 0.31 | 0.107 |
| Rv1565c_day32 | 0.13 | -1.003 |
| secA2_input | 0.142 | 0.98 |
| delta_Rv3594 | 0.038 | 1.355 |
| delta_Rv3717 | 0.039 | -1.133 |
| delta_Rv3811 | 0.44 | 0.385 |
| delta_Rv0954 | 0.309 | 1.774 |
| PonA1 | 0.14 | 0.871 |
| EccD1_KO | 0.033 | 0.339 |
| EspI_KO | 0.322 | 1.743 |
| PE35_KO | -0.166 | 0.823 |
| PPE68_KO | -0.41 | 1.83 |
| glycerol2 | 0.664 | 0.811 |
| lignocerate | 0.412 | -0.329 |
| oleate | 0.491 | -0.216 |
| phosphatidylcholine | 0.602 | 0.494 |
| acetate | 0.951 | -0.574 |
| glucAc | 0.247 | -1.251 |
| Rv0950ko | 0.929 | -0.654 |
| Rv1096ko | 0.663 | -1.372 |
| Rv3684ko | 0.914 | -0.321 |
| delta_otsA_trehalose | 1.783 | 0.407 |