Top 10 genes with highest correlation to Rv3715c/recR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1908c/katG | (cc=0.6779) | info on Rv1908c/katG |
| Rv1633/uvrB | (cc=0.6607) | info on Rv1633/uvrB |
| Rv1420/uvrC | (cc=0.6191) | info on Rv1420/uvrC |
| Rv1701/- | (cc=0.6058) | info on Rv1701/- |
| Rv1401/- | (cc=0.6015) | info on Rv1401/- |
| Rv1638/uvrA | (cc=0.6001) | info on Rv1638/uvrA |
| Rv0949/uvrD1 | (cc=0.5844) | info on Rv0949/uvrD1 |
| Rv3261/fbiA | (cc=0.579) | info on Rv3261/fbiA |
| Rv3269/- | (cc=0.5771) | info on Rv3269/- |
| Rv3624c/hpt | (cc=0.5628) | info on Rv3624c/hpt |
Correlation of Rv3715c/recR with Rv1420/uvrC
Normalized LFCs for Rv3715c/recR:
(description and provenance of datasets)
| Rv3715c/recR | Rv1420/uvrC | |
| Fe_supp_jason_reseq | 2.883 | 1.773 |
| low_pH_jason_reseq | 0.0 | 0.085 |
| NO_jason_reseq | -1.993 | -1.467 |
| B6_jason_reseq | -0.413 | -0.799 |
| MHCII_jason_reseq | -0.283 | -0.217 |
| Isoniazid02 | 0.987 | -0.457 |
| Rifampicin4 | -0.357 | 0.699 |
| Ethambutol3 | 0.574 | -1.07 |
| Meropenem3 | 0.223 | -0.522 |
| Vancomycin16 | -0.976 | 0.162 |
| Rv2680_day32 | -0.642 | 0.222 |
| H37Rv_KO_MarP | -1.411 | -2.503 |
| hypoxia_3wks | -0.522 | 0.949 |
| hypoxia_6wks | -0.576 | 0.867 |
| glycerol | 1.537 | 0.136 |
| cholesterol | 0.463 | 0.711 |
| AJ | 0.324 | -0.541 |
| Bibs02 | 0.371 | 1.827 |
| Bibs02c | -0.527 | 0.399 |
| BL6 | 0.649 | 0.816 |
| BL6a | 0.0 | 1.291 |
| BXD01 | 0.79 | 1.666 |
| BXD010 | 0.722 | -0.191 |
| BXD011 | 0.0 | 1.128 |
| BXD03 | 1.448 | 1.157 |
| BXD04 | 0.395 | -0.09 |
| BXD05 | 0.502 | 0.539 |
| BXD06 | 0.566 | 0.92 |
| BXD07 | 1.445 | 0.555 |
| BXD08 | 1.351 | 0.653 |
| BXD09 | 0.285 | 0.916 |
| CAST | -0.809 | -0.976 |
| CCcont | 2.556 | 2.214 |
| DS01 | 0.171 | -0.171 |
| DS02 | -0.764 | -0.922 |
| DS04 | 0.394 | 0.777 |
| DS0c | 0.157 | 0.652 |
| GP01 | 1.484 | -0.147 |
| GP02 | 0.06 | 0.292 |
| GP0c | 0.893 | 0.748 |
| NOD | -0.566 | -0.524 |
| NZO | 1.124 | 0.0 |
| PWK | -0.494 | -0.293 |
| H37Rv_KO_CtpC | 2.019 | 1.232 |
| H37Rv_KO_CtpD | 0.537 | 0.381 |
| H37Rv_KO_Rv1272 | -0.495 | 1.409 |
| H37Rv_KO_SugABC | 1.605 | 1.015 |
| H37Rv_KO_MbtN | 0.487 | 1.942 |
| Trans05 | 0.344 | 1.847 |
| macrophage_unactivated | 0.669 | 0.253 |
| IL1 | -1.011 | -0.658 |
| Rapamycin | -0.491 | 0.7 |
| Tcell | 1.098 | 1.769 |
| GMCSF | -1.444 | -0.224 |
| IFNab | -0.236 | 2.276 |
| IFNg | -0.911 | 0.882 |
| IFNg_GMCSF1 | -0.779 | 0.716 |
| Rv1432_day32 | 0.0 | -0.568 |
| Rv1565c_day32 | -0.766 | 0.873 |
| secA2_input | 0.994 | 0.276 |
| delta_Rv3594 | 0.961 | 1.398 |
| delta_Rv3717 | 0.257 | 1.754 |
| delta_Rv3811 | 0.934 | 1.895 |
| delta_Rv0954 | 1.145 | 0.282 |
| PonA1 | 0.145 | 0.284 |
| EccD1_KO | -1.786 | -1.582 |
| EspI_KO | -2.772 | -1.124 |
| PE35_KO | -0.817 | 0.184 |
| PPE68_KO | -1.805 | -0.586 |
| glycerol2 | -2.434 | -1.574 |
| lignocerate | -2.02 | -1.959 |
| oleate | -1.961 | -2.181 |
| phosphatidylcholine | -2.027 | -2.06 |
| acetate | -0.166 | -0.248 |
| glucAc | 0.605 | -0.238 |
| Rv0950ko | -0.926 | -1.288 |
| Rv1096ko | 0.507 | -0.057 |
| Rv3684ko | 1.094 | -0.445 |
| delta_otsA_trehalose | 0.83 | 1.089 |