Top 10 genes with highest correlation to Rv3714c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.5081) | info on Rv0233/nrdB |
| Rv0592/mce2D | (cc=0.4955) | info on Rv0592/mce2D |
| Rv3733c/- | (cc=0.4877) | info on Rv3733c/- |
| Rv0395/- | (cc=0.469) | info on Rv0395/- |
| Rv2994/- | (cc=0.4678) | info on Rv2994/- |
| Rv2771c/- | (cc=0.4464) | info on Rv2771c/- |
| Rv3696c/glpK | (cc=0.4447) | info on Rv3696c/glpK |
| Rv1318c/- | (cc=0.4427) | info on Rv1318c/- |
| Rv1135A/- | (cc=0.4413) | info on Rv1135A/- |
| Rv0303/- | (cc=0.4338) | info on Rv0303/- |
Correlation of Rv3714c/- with Rv3696c/glpK
Normalized LFCs for Rv3714c/-:
(description and provenance of datasets)
| Rv3714c/- | Rv3696c/glpK | |
| Fe_supp_jason_reseq | -0.398 | 1.778 |
| low_pH_jason_reseq | -0.363 | 6.0 |
| NO_jason_reseq | 0.011 | 6.0 |
| B6_jason_reseq | 0.719 | 6.0 |
| MHCII_jason_reseq | 1.035 | 1.383 |
| Isoniazid02 | 0.778 | -1.455 |
| Rifampicin4 | -0.011 | -1.995 |
| Ethambutol3 | 0.55 | 1.233 |
| Meropenem3 | -0.108 | -0.771 |
| Vancomycin16 | 1.387 | -1.366 |
| Rv2680_day32 | 0.488 | 2.647 |
| H37Rv_KO_MarP | 0.169 | 0.244 |
| hypoxia_3wks | 0.49 | 1.75 |
| hypoxia_6wks | 1.184 | 6.0 |
| glycerol | -1.508 | -5.227 |
| cholesterol | -0.909 | -0.639 |
| AJ | 0.202 | 4.528 |
| Bibs02 | -0.147 | -0.332 |
| Bibs02c | 0.108 | 0.089 |
| BL6 | -0.168 | -1.033 |
| BL6a | -0.013 | 0.664 |
| BXD01 | 0.43 | 1.68 |
| BXD010 | 0.139 | 1.312 |
| BXD011 | 0.21 | 2.299 |
| BXD03 | 0.323 | -0.426 |
| BXD04 | 0.597 | 0.835 |
| BXD05 | -0.14 | 0.526 |
| BXD06 | 0.267 | 2.16 |
| BXD07 | 0.08 | 1.097 |
| BXD08 | 0.297 | 0.628 |
| BXD09 | 0.279 | 1.682 |
| CAST | 0.607 | 5.014 |
| CCcont | -0.643 | -1.866 |
| DS01 | 0.433 | 0.161 |
| DS02 | 0.651 | 0.402 |
| DS04 | 1.023 | 1.456 |
| DS0c | 0.638 | -2.154 |
| GP01 | -0.144 | -2.071 |
| GP02 | 0.641 | -1.551 |
| GP0c | -0.46 | -2.908 |
| NOD | 1.111 | 2.301 |
| NZO | 0.526 | 4.859 |
| PWK | 0.367 | 6.0 |
| H37Rv_KO_CtpC | -0.288 | 0.534 |
| H37Rv_KO_CtpD | 0.055 | 2.55 |
| H37Rv_KO_Rv1272 | -1.053 | -1.936 |
| H37Rv_KO_SugABC | -0.819 | -0.424 |
| H37Rv_KO_MbtN | -0.526 | -0.166 |
| Trans05 | -0.625 | -0.63 |
| macrophage_unactivated | 0.095 | -1.607 |
| IL1 | 0.0 | -1.041 |
| Rapamycin | -0.19 | -1.234 |
| Tcell | 0.935 | 0.596 |
| GMCSF | 0.079 | -2.54 |
| IFNab | -0.333 | -1.061 |
| IFNg | -0.029 | -0.81 |
| IFNg_GMCSF1 | -0.072 | 1.273 |
| Rv1432_day32 | 1.288 | 0.343 |
| Rv1565c_day32 | 0.158 | -0.924 |
| secA2_input | 0.769 | -0.945 |
| delta_Rv3594 | -0.971 | -2.6 |
| delta_Rv3717 | -0.799 | -1.286 |
| delta_Rv3811 | -1.387 | -2.051 |
| delta_Rv0954 | -1.0 | -1.101 |
| PonA1 | -0.336 | 1.358 |
| EccD1_KO | -0.697 | 0.0 |
| EspI_KO | -0.371 | -0.265 |
| PE35_KO | -0.446 | 1.339 |
| PPE68_KO | -0.403 | 0.793 |
| glycerol2 | -0.661 | -2.844 |
| lignocerate | -0.621 | -1.967 |
| oleate | -0.793 | -2.165 |
| phosphatidylcholine | -0.793 | -2.139 |
| acetate | -1.614 | -1.519 |
| glucAc | -0.741 | -1.194 |
| Rv0950ko | 0.724 | -0.874 |
| Rv1096ko | 0.552 | -0.875 |
| Rv3684ko | 0.196 | -0.609 |
| delta_otsA_trehalose | 0.411 | -0.103 |