Top 10 genes with highest correlation to Rv3714c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.5081) | info on Rv0233/nrdB |
| Rv0592/mce2D | (cc=0.4955) | info on Rv0592/mce2D |
| Rv3733c/- | (cc=0.4877) | info on Rv3733c/- |
| Rv0395/- | (cc=0.469) | info on Rv0395/- |
| Rv2994/- | (cc=0.4678) | info on Rv2994/- |
| Rv2771c/- | (cc=0.4464) | info on Rv2771c/- |
| Rv3696c/glpK | (cc=0.4447) | info on Rv3696c/glpK |
| Rv1318c/- | (cc=0.4427) | info on Rv1318c/- |
| Rv1135A/- | (cc=0.4413) | info on Rv1135A/- |
| Rv0303/- | (cc=0.4338) | info on Rv0303/- |
Correlation of Rv3714c/- with Rv0233/nrdB
Normalized LFCs for Rv3714c/-:
(description and provenance of datasets)
| Rv3714c/- | Rv0233/nrdB | |
| Fe_supp_jason_reseq | -0.398 | 0.2 |
| low_pH_jason_reseq | -0.363 | -0.095 |
| NO_jason_reseq | 0.011 | -0.131 |
| B6_jason_reseq | 0.719 | 0.854 |
| MHCII_jason_reseq | 1.035 | 1.421 |
| Isoniazid02 | 0.778 | 0.322 |
| Rifampicin4 | -0.011 | -0.192 |
| Ethambutol3 | 0.55 | 0.154 |
| Meropenem3 | -0.108 | 0.291 |
| Vancomycin16 | 1.387 | -0.443 |
| Rv2680_day32 | 0.488 | 0.614 |
| H37Rv_KO_MarP | 0.169 | 0.167 |
| hypoxia_3wks | 0.49 | -0.159 |
| hypoxia_6wks | 1.184 | 0.192 |
| glycerol | -1.508 | -0.973 |
| cholesterol | -0.909 | -0.39 |
| AJ | 0.202 | 0.316 |
| Bibs02 | -0.147 | 0.891 |
| Bibs02c | 0.108 | 0.543 |
| BL6 | -0.168 | -1.416 |
| BL6a | -0.013 | -0.575 |
| BXD01 | 0.43 | -0.696 |
| BXD010 | 0.139 | -0.537 |
| BXD011 | 0.21 | -0.693 |
| BXD03 | 0.323 | -1.509 |
| BXD04 | 0.597 | -0.539 |
| BXD05 | -0.14 | -0.41 |
| BXD06 | 0.267 | -0.887 |
| BXD07 | 0.08 | -1.157 |
| BXD08 | 0.297 | -0.354 |
| BXD09 | 0.279 | -0.919 |
| CAST | 0.607 | -0.038 |
| CCcont | -0.643 | -1.564 |
| DS01 | 0.433 | 1.025 |
| DS02 | 0.651 | 0.748 |
| DS04 | 1.023 | 0.933 |
| DS0c | 0.638 | 0.548 |
| GP01 | -0.144 | -0.911 |
| GP02 | 0.641 | -0.359 |
| GP0c | -0.46 | -0.382 |
| NOD | 1.111 | 0.605 |
| NZO | 0.526 | 0.12 |
| PWK | 0.367 | -0.242 |
| H37Rv_KO_CtpC | -0.288 | -1.19 |
| H37Rv_KO_CtpD | 0.055 | -0.803 |
| H37Rv_KO_Rv1272 | -1.053 | -0.626 |
| H37Rv_KO_SugABC | -0.819 | -0.316 |
| H37Rv_KO_MbtN | -0.526 | -0.755 |
| Trans05 | -0.625 | -0.13 |
| macrophage_unactivated | 0.095 | -1.083 |
| IL1 | 0.0 | -0.193 |
| Rapamycin | -0.19 | -0.786 |
| Tcell | 0.935 | -0.046 |
| GMCSF | 0.079 | 0.459 |
| IFNab | -0.333 | -0.478 |
| IFNg | -0.029 | 0.38 |
| IFNg_GMCSF1 | -0.072 | -0.396 |
| Rv1432_day32 | 1.288 | 0.042 |
| Rv1565c_day32 | 0.158 | 0.963 |
| secA2_input | 0.769 | 0.106 |
| delta_Rv3594 | -0.971 | -0.399 |
| delta_Rv3717 | -0.799 | -0.766 |
| delta_Rv3811 | -1.387 | -0.589 |
| delta_Rv0954 | -1.0 | -0.252 |
| PonA1 | -0.336 | -0.066 |
| EccD1_KO | -0.697 | -0.286 |
| EspI_KO | -0.371 | -0.368 |
| PE35_KO | -0.446 | -1.041 |
| PPE68_KO | -0.403 | -0.483 |
| glycerol2 | -0.661 | -0.911 |
| lignocerate | -0.621 | -0.609 |
| oleate | -0.793 | -0.404 |
| phosphatidylcholine | -0.793 | -0.598 |
| acetate | -1.614 | -1.107 |
| glucAc | -0.741 | -1.029 |
| Rv0950ko | 0.724 | 0.308 |
| Rv1096ko | 0.552 | 0.805 |
| Rv3684ko | 0.196 | 0.259 |
| delta_otsA_trehalose | 0.411 | 0.437 |