Top 10 genes with highest correlation to Rv3711c/dnaQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0701/rplC | (cc=0.5726) | info on Rv0701/rplC |
| Rv3673c/- | (cc=0.5346) | info on Rv3673c/- |
| Rv0057/- | (cc=0.51) | info on Rv0057/- |
| Rv2882c/frr | (cc=0.4876) | info on Rv2882c/frr |
| Rv2678c/hemE | (cc=0.4809) | info on Rv2678c/hemE |
| Rv2622/- | (cc=0.4761) | info on Rv2622/- |
| Rv3763/lpqH | (cc=0.4662) | info on Rv3763/lpqH |
| Rv3670/ephE | (cc=0.4655) | info on Rv3670/ephE |
| Rv2164c/- | (cc=0.4651) | info on Rv2164c/- |
| Rv0648/- | (cc=0.4575) | info on Rv0648/- |
Correlation of Rv3711c/dnaQ with Rv2622/-
Normalized LFCs for Rv3711c/dnaQ:
(description and provenance of datasets)
| Rv3711c/dnaQ | Rv2622/- | |
| Fe_supp_jason_reseq | -0.433 | -2.369 |
| low_pH_jason_reseq | -0.047 | -0.694 |
| NO_jason_reseq | -0.074 | -0.675 |
| B6_jason_reseq | -0.604 | -0.658 |
| MHCII_jason_reseq | -0.194 | -0.845 |
| Isoniazid02 | -0.167 | -1.765 |
| Rifampicin4 | -0.571 | -0.108 |
| Ethambutol3 | -0.209 | -0.582 |
| Meropenem3 | 1.414 | -1.55 |
| Vancomycin16 | -0.332 | -1.462 |
| Rv2680_day32 | 0.627 | -0.322 |
| H37Rv_KO_MarP | -0.238 | 0.15 |
| hypoxia_3wks | -0.439 | -0.311 |
| hypoxia_6wks | -0.328 | 0.522 |
| glycerol | 1.463 | 0.745 |
| cholesterol | 0.32 | 0.877 |
| AJ | 0.0 | -0.839 |
| Bibs02 | -0.086 | 0.535 |
| Bibs02c | 0.788 | -0.732 |
| BL6 | 0.599 | 1.405 |
| BL6a | 0.375 | -0.716 |
| BXD01 | -0.392 | -1.356 |
| BXD010 | -0.092 | -0.096 |
| BXD011 | 0.157 | 0.117 |
| BXD03 | 0.175 | -0.249 |
| BXD04 | -0.01 | -1.4 |
| BXD05 | 0.47 | -0.614 |
| BXD06 | 0.209 | -1.15 |
| BXD07 | 0.042 | -1.67 |
| BXD08 | 0.06 | -0.089 |
| BXD09 | -0.089 | -0.508 |
| CAST | 0.522 | -0.886 |
| CCcont | -0.012 | -1.206 |
| DS01 | 0.89 | -0.137 |
| DS02 | 0.44 | -1.914 |
| DS04 | 0.645 | -0.909 |
| DS0c | 0.479 | 0.278 |
| GP01 | -0.173 | 0.524 |
| GP02 | 0.068 | 0.02 |
| GP0c | 0.517 | 0.671 |
| NOD | -0.124 | -0.786 |
| NZO | 0.377 | 0.228 |
| PWK | 0.696 | 0.894 |
| H37Rv_KO_CtpC | -1.011 | -0.957 |
| H37Rv_KO_CtpD | 0.811 | 1.241 |
| H37Rv_KO_Rv1272 | 0.837 | 0.231 |
| H37Rv_KO_SugABC | 0.921 | -0.381 |
| H37Rv_KO_MbtN | -0.228 | -0.293 |
| Trans05 | 0.413 | -0.58 |
| macrophage_unactivated | -0.893 | -1.761 |
| IL1 | -0.412 | -1.258 |
| Rapamycin | 0.028 | -0.439 |
| Tcell | -0.424 | -0.616 |
| GMCSF | -0.217 | -2.044 |
| IFNab | 0.209 | -0.082 |
| IFNg | 0.251 | -1.438 |
| IFNg_GMCSF1 | 0.622 | -0.355 |
| Rv1432_day32 | 0.175 | -0.138 |
| Rv1565c_day32 | -0.499 | -0.218 |
| secA2_input | 1.19 | -0.801 |
| delta_Rv3594 | 0.889 | 1.883 |
| delta_Rv3717 | 1.055 | 0.785 |
| delta_Rv3811 | -0.034 | 0.639 |
| delta_Rv0954 | -0.234 | 1.441 |
| PonA1 | 0.436 | 1.277 |
| EccD1_KO | -1.25 | -2.654 |
| EspI_KO | -0.91 | -2.598 |
| PE35_KO | -1.388 | -1.187 |
| PPE68_KO | -1.523 | -1.763 |
| glycerol2 | 0.345 | 0.083 |
| lignocerate | 0.487 | 0.302 |
| oleate | -0.553 | 0.62 |
| phosphatidylcholine | -0.129 | 0.382 |
| acetate | 0.387 | 0.369 |
| glucAc | 0.267 | 0.762 |
| Rv0950ko | 0.606 | 2.05 |
| Rv1096ko | 0.781 | 1.764 |
| Rv3684ko | 0.819 | 0.982 |
| delta_otsA_trehalose | 0.657 | 0.941 |