Top 10 genes with highest correlation to Rv3711c/dnaQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0701/rplC | (cc=0.5726) | info on Rv0701/rplC |
| Rv3673c/- | (cc=0.5346) | info on Rv3673c/- |
| Rv0057/- | (cc=0.51) | info on Rv0057/- |
| Rv2882c/frr | (cc=0.4876) | info on Rv2882c/frr |
| Rv2678c/hemE | (cc=0.4809) | info on Rv2678c/hemE |
| Rv2622/- | (cc=0.4761) | info on Rv2622/- |
| Rv3763/lpqH | (cc=0.4662) | info on Rv3763/lpqH |
| Rv3670/ephE | (cc=0.4655) | info on Rv3670/ephE |
| Rv2164c/- | (cc=0.4651) | info on Rv2164c/- |
| Rv0648/- | (cc=0.4575) | info on Rv0648/- |
Correlation of Rv3711c/dnaQ with Rv0057/-
Normalized LFCs for Rv3711c/dnaQ:
(description and provenance of datasets)
| Rv3711c/dnaQ | Rv0057/- | |
| Fe_supp_jason_reseq | -0.433 | -0.033 |
| low_pH_jason_reseq | -0.047 | -1.032 |
| NO_jason_reseq | -0.074 | -1.297 |
| B6_jason_reseq | -0.604 | -0.873 |
| MHCII_jason_reseq | -0.194 | -0.572 |
| Isoniazid02 | -0.167 | -0.263 |
| Rifampicin4 | -0.571 | -1.819 |
| Ethambutol3 | -0.209 | -0.764 |
| Meropenem3 | 1.414 | -0.335 |
| Vancomycin16 | -0.332 | -0.565 |
| Rv2680_day32 | 0.627 | 0.371 |
| H37Rv_KO_MarP | -0.238 | 0.301 |
| hypoxia_3wks | -0.439 | -1.559 |
| hypoxia_6wks | -0.328 | -0.685 |
| glycerol | 1.463 | 0.341 |
| cholesterol | 0.32 | 0.789 |
| AJ | 0.0 | 0.792 |
| Bibs02 | -0.086 | 0.281 |
| Bibs02c | 0.788 | 1.699 |
| BL6 | 0.599 | -0.198 |
| BL6a | 0.375 | 1.507 |
| BXD01 | -0.392 | -0.416 |
| BXD010 | -0.092 | -0.258 |
| BXD011 | 0.157 | -0.376 |
| BXD03 | 0.175 | 0.514 |
| BXD04 | -0.01 | 0.19 |
| BXD05 | 0.47 | -0.646 |
| BXD06 | 0.209 | 0.42 |
| BXD07 | 0.042 | -0.19 |
| BXD08 | 0.06 | 0.024 |
| BXD09 | -0.089 | 0.237 |
| CAST | 0.522 | 0.529 |
| CCcont | -0.012 | 0.548 |
| DS01 | 0.89 | 1.235 |
| DS02 | 0.44 | 0.466 |
| DS04 | 0.645 | 0.17 |
| DS0c | 0.479 | 0.262 |
| GP01 | -0.173 | 0.255 |
| GP02 | 0.068 | -0.789 |
| GP0c | 0.517 | -0.966 |
| NOD | -0.124 | 1.709 |
| NZO | 0.377 | 0.627 |
| PWK | 0.696 | 1.722 |
| H37Rv_KO_CtpC | -1.011 | 0.059 |
| H37Rv_KO_CtpD | 0.811 | -0.121 |
| H37Rv_KO_Rv1272 | 0.837 | 0.799 |
| H37Rv_KO_SugABC | 0.921 | 0.12 |
| H37Rv_KO_MbtN | -0.228 | -0.058 |
| Trans05 | 0.413 | -0.049 |
| macrophage_unactivated | -0.893 | 0.404 |
| IL1 | -0.412 | -0.78 |
| Rapamycin | 0.028 | -0.807 |
| Tcell | -0.424 | 0.0 |
| GMCSF | -0.217 | 0.338 |
| IFNab | 0.209 | -0.248 |
| IFNg | 0.251 | 0.775 |
| IFNg_GMCSF1 | 0.622 | -0.17 |
| Rv1432_day32 | 0.175 | -0.485 |
| Rv1565c_day32 | -0.499 | -1.112 |
| secA2_input | 1.19 | -0.485 |
| delta_Rv3594 | 0.889 | 0.424 |
| delta_Rv3717 | 1.055 | 0.871 |
| delta_Rv3811 | -0.034 | 0.668 |
| delta_Rv0954 | -0.234 | 0.826 |
| PonA1 | 0.436 | 0.152 |
| EccD1_KO | -1.25 | -1.503 |
| EspI_KO | -0.91 | -0.841 |
| PE35_KO | -1.388 | -1.552 |
| PPE68_KO | -1.523 | -1.542 |
| glycerol2 | 0.345 | 0.105 |
| lignocerate | 0.487 | 0.15 |
| oleate | -0.553 | -1.021 |
| phosphatidylcholine | -0.129 | -0.398 |
| acetate | 0.387 | 0.884 |
| glucAc | 0.267 | 0.923 |
| Rv0950ko | 0.606 | 0.498 |
| Rv1096ko | 0.781 | 0.781 |
| Rv3684ko | 0.819 | 0.0 |
| delta_otsA_trehalose | 0.657 | -0.16 |