Top 10 genes with highest correlation to Rv3703c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2606c/snzP | (cc=0.6369) | info on Rv2606c/snzP |
| Rv1568/bioA | (cc=0.6223) | info on Rv1568/bioA |
| Rv0391/metZ | (cc=0.6187) | info on Rv0391/metZ |
| Rv1590/- | (cc=0.6155) | info on Rv1590/- |
| Rv0485/- | (cc=0.6137) | info on Rv0485/- |
| Rv0390/- | (cc=0.5965) | info on Rv0390/- |
| Rv3550/echA20 | (cc=0.594) | info on Rv3550/echA20 |
| Rv3882c/eccE1 | (cc=0.5919) | info on Rv3882c/eccE1 |
| Rv1569/bioF1 | (cc=0.5879) | info on Rv1569/bioF1 |
| Rv3877/eccD1 | (cc=0.5816) | info on Rv3877/eccD1 |
Correlation of Rv3703c/- with Rv3550/echA20
Normalized LFCs for Rv3703c/-:
(description and provenance of datasets)
| Rv3703c/- | Rv3550/echA20 | |
| Fe_supp_jason_reseq | -0.893 | -0.227 |
| low_pH_jason_reseq | -0.622 | 0.862 |
| NO_jason_reseq | -0.189 | 1.134 |
| B6_jason_reseq | -0.733 | -2.946 |
| MHCII_jason_reseq | -0.868 | -2.595 |
| Isoniazid02 | 0.058 | 0.477 |
| Rifampicin4 | -0.111 | -0.084 |
| Ethambutol3 | -0.181 | -0.568 |
| Meropenem3 | -0.392 | -0.835 |
| Vancomycin16 | -0.22 | 0.236 |
| Rv2680_day32 | -0.954 | -1.353 |
| H37Rv_KO_MarP | 0.484 | -0.684 |
| hypoxia_3wks | -1.021 | -0.929 |
| hypoxia_6wks | -0.58 | -1.455 |
| glycerol | -0.44 | 1.289 |
| cholesterol | -0.692 | -2.021 |
| AJ | -0.782 | -1.439 |
| Bibs02 | -0.817 | -2.551 |
| Bibs02c | -2.052 | -2.919 |
| BL6 | -0.502 | -1.745 |
| BL6a | -1.725 | -2.566 |
| BXD01 | -1.046 | -1.265 |
| BXD010 | -0.934 | -1.435 |
| BXD011 | -0.929 | -1.535 |
| BXD03 | -1.057 | -0.382 |
| BXD04 | -1.02 | -1.49 |
| BXD05 | -0.633 | -1.405 |
| BXD06 | -0.833 | -1.729 |
| BXD07 | -1.569 | -1.345 |
| BXD08 | -0.747 | -1.118 |
| BXD09 | -1.307 | -1.181 |
| CAST | -0.157 | -2.404 |
| CCcont | -1.03 | 0.739 |
| DS01 | -0.984 | -3.295 |
| DS02 | -1.128 | -0.321 |
| DS04 | -1.21 | -2.513 |
| DS0c | -0.715 | -2.264 |
| GP01 | 0.109 | -0.83 |
| GP02 | -0.744 | -1.078 |
| GP0c | 0.54 | 0.23 |
| NOD | 0.649 | -1.627 |
| NZO | -0.985 | -2.783 |
| PWK | -0.176 | -2.541 |
| H37Rv_KO_CtpC | -0.558 | -2.266 |
| H37Rv_KO_CtpD | -0.556 | -1.322 |
| H37Rv_KO_Rv1272 | -1.057 | -1.968 |
| H37Rv_KO_SugABC | -0.168 | -1.283 |
| H37Rv_KO_MbtN | 0.575 | -1.438 |
| Trans05 | -1.007 | -0.685 |
| macrophage_unactivated | 0.322 | -0.549 |
| IL1 | 0.0 | 1.536 |
| Rapamycin | 0.0 | 2.645 |
| Tcell | -0.036 | -1.802 |
| GMCSF | -0.029 | 1.368 |
| IFNab | 0.063 | 2.207 |
| IFNg | 0.112 | 0.414 |
| IFNg_GMCSF1 | -0.204 | -0.211 |
| Rv1432_day32 | 0.012 | 0.0 |
| Rv1565c_day32 | -0.463 | -2.246 |
| secA2_input | 0.532 | -0.759 |
| delta_Rv3594 | 0.577 | 1.839 |
| delta_Rv3717 | 0.641 | 2.848 |
| delta_Rv3811 | 0.935 | 2.208 |
| delta_Rv0954 | 1.023 | 4.117 |
| PonA1 | 1.393 | 3.064 |
| EccD1_KO | -0.878 | 1.365 |
| EspI_KO | -0.673 | -1.132 |
| PE35_KO | -0.621 | 0.228 |
| PPE68_KO | -1.597 | 0.71 |
| glycerol2 | 0.528 | 1.487 |
| lignocerate | 0.686 | 2.377 |
| oleate | 1.104 | -1.704 |
| phosphatidylcholine | 0.384 | 1.648 |
| acetate | 0.961 | 2.803 |
| glucAc | 0.67 | 2.347 |
| Rv0950ko | 0.594 | -0.498 |
| Rv1096ko | 0.651 | 0.85 |
| Rv3684ko | 0.318 | 0.249 |
| delta_otsA_trehalose | 0.151 | -0.557 |