Top 10 genes with highest correlation to Rv3703c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2606c/snzP | (cc=0.6369) | info on Rv2606c/snzP |
| Rv1568/bioA | (cc=0.6223) | info on Rv1568/bioA |
| Rv0391/metZ | (cc=0.6187) | info on Rv0391/metZ |
| Rv1590/- | (cc=0.6155) | info on Rv1590/- |
| Rv0485/- | (cc=0.6137) | info on Rv0485/- |
| Rv0390/- | (cc=0.5965) | info on Rv0390/- |
| Rv3550/echA20 | (cc=0.594) | info on Rv3550/echA20 |
| Rv3882c/eccE1 | (cc=0.5919) | info on Rv3882c/eccE1 |
| Rv1569/bioF1 | (cc=0.5879) | info on Rv1569/bioF1 |
| Rv3877/eccD1 | (cc=0.5816) | info on Rv3877/eccD1 |
Correlation of Rv3703c/- with Rv0391/metZ
Normalized LFCs for Rv3703c/-:
(description and provenance of datasets)
| Rv3703c/- | Rv0391/metZ | |
| Fe_supp_jason_reseq | -0.893 | -1.075 |
| low_pH_jason_reseq | -0.622 | -0.35 |
| NO_jason_reseq | -0.189 | -0.265 |
| B6_jason_reseq | -0.733 | -2.065 |
| MHCII_jason_reseq | -0.868 | -2.712 |
| Isoniazid02 | 0.058 | -1.052 |
| Rifampicin4 | -0.111 | 0.36 |
| Ethambutol3 | -0.181 | -1.009 |
| Meropenem3 | -0.392 | -1.689 |
| Vancomycin16 | -0.22 | -0.512 |
| Rv2680_day32 | -0.954 | -3.196 |
| H37Rv_KO_MarP | 0.484 | -0.334 |
| hypoxia_3wks | -1.021 | -1.918 |
| hypoxia_6wks | -0.58 | -1.075 |
| glycerol | -0.44 | -3.065 |
| cholesterol | -0.692 | -4.165 |
| AJ | -0.782 | -1.814 |
| Bibs02 | -0.817 | -2.42 |
| Bibs02c | -2.052 | -2.986 |
| BL6 | -0.502 | -1.898 |
| BL6a | -1.725 | -3.204 |
| BXD01 | -1.046 | -2.411 |
| BXD010 | -0.934 | -1.463 |
| BXD011 | -0.929 | -2.741 |
| BXD03 | -1.057 | -1.376 |
| BXD04 | -1.02 | -2.067 |
| BXD05 | -0.633 | -1.781 |
| BXD06 | -0.833 | -2.268 |
| BXD07 | -1.569 | -2.809 |
| BXD08 | -0.747 | -1.498 |
| BXD09 | -1.307 | -2.555 |
| CAST | -0.157 | -2.75 |
| CCcont | -1.03 | -1.498 |
| DS01 | -0.984 | -2.236 |
| DS02 | -1.128 | -2.379 |
| DS04 | -1.21 | -2.645 |
| DS0c | -0.715 | -2.145 |
| GP01 | 0.109 | -0.581 |
| GP02 | -0.744 | -0.884 |
| GP0c | 0.54 | -1.304 |
| NOD | 0.649 | -0.155 |
| NZO | -0.985 | -2.719 |
| PWK | -0.176 | -2.674 |
| H37Rv_KO_CtpC | -0.558 | -1.27 |
| H37Rv_KO_CtpD | -0.556 | -1.953 |
| H37Rv_KO_Rv1272 | -1.057 | -2.755 |
| H37Rv_KO_SugABC | -0.168 | -0.382 |
| H37Rv_KO_MbtN | 0.575 | -1.286 |
| Trans05 | -1.007 | -2.701 |
| macrophage_unactivated | 0.322 | -0.243 |
| IL1 | 0.0 | 1.305 |
| Rapamycin | 0.0 | -0.488 |
| Tcell | -0.036 | 1.698 |
| GMCSF | -0.029 | -1.064 |
| IFNab | 0.063 | -0.523 |
| IFNg | 0.112 | 0.099 |
| IFNg_GMCSF1 | -0.204 | -1.062 |
| Rv1432_day32 | 0.012 | -3.707 |
| Rv1565c_day32 | -0.463 | -2.504 |
| secA2_input | 0.532 | 0.307 |
| delta_Rv3594 | 0.577 | -1.055 |
| delta_Rv3717 | 0.641 | -1.128 |
| delta_Rv3811 | 0.935 | -1.268 |
| delta_Rv0954 | 1.023 | -0.491 |
| PonA1 | 1.393 | 0.465 |
| EccD1_KO | -0.878 | 0.0 |
| EspI_KO | -0.673 | -0.588 |
| PE35_KO | -0.621 | -0.715 |
| PPE68_KO | -1.597 | -0.221 |
| glycerol2 | 0.528 | 0.422 |
| lignocerate | 0.686 | -0.044 |
| oleate | 1.104 | -0.129 |
| phosphatidylcholine | 0.384 | -0.076 |
| acetate | 0.961 | -0.09 |
| glucAc | 0.67 | -0.623 |
| Rv0950ko | 0.594 | 0.157 |
| Rv1096ko | 0.651 | 0.422 |
| Rv3684ko | 0.318 | -0.458 |
| delta_otsA_trehalose | 0.151 | 0.161 |