Top 10 genes with highest correlation to Rv3668c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0007/- | (cc=0.5181) | info on Rv0007/- |
| Rv3086/adhD | (cc=0.499) | info on Rv3086/adhD |
| Rv0314c/- | (cc=0.4744) | info on Rv0314c/- |
| Rv2594c/ruvC | (cc=0.4737) | info on Rv2594c/ruvC |
| Rv0995/rimJ | (cc=0.4721) | info on Rv0995/rimJ |
| Rv2171/lppM | (cc=0.4678) | info on Rv2171/lppM |
| Rv0656c/vapC6 | (cc=0.4526) | info on Rv0656c/vapC6 |
| Rv0132c/fgd2 | (cc=0.4523) | info on Rv0132c/fgd2 |
| Rv0994/moeA1 | (cc=0.4491) | info on Rv0994/moeA1 |
| Rv0361/- | (cc=0.4425) | info on Rv0361/- |
Correlation of Rv3668c/- with Rv0656c/vapC6
Normalized LFCs for Rv3668c/-:
(description and provenance of datasets)
| Rv3668c/- | Rv0656c/vapC6 | |
| Fe_supp_jason_reseq | -0.612 | -0.712 |
| low_pH_jason_reseq | -1.071 | -2.073 |
| NO_jason_reseq | 0.037 | -0.389 |
| B6_jason_reseq | -0.297 | -0.589 |
| MHCII_jason_reseq | -0.082 | 0.038 |
| Isoniazid02 | -0.167 | 2.85 |
| Rifampicin4 | -2.767 | -0.36 |
| Ethambutol3 | -0.862 | 2.24 |
| Meropenem3 | -1.266 | -0.066 |
| Vancomycin16 | -1.22 | 0.297 |
| Rv2680_day32 | 1.287 | 1.475 |
| H37Rv_KO_MarP | 0.454 | 0.999 |
| hypoxia_3wks | 0.0 | -0.582 |
| hypoxia_6wks | -0.666 | -0.031 |
| glycerol | -0.149 | -0.233 |
| cholesterol | 1.1 | 1.065 |
| AJ | 0.324 | 0.321 |
| Bibs02 | -0.31 | 0.954 |
| Bibs02c | 0.199 | 0.632 |
| BL6 | 0.603 | 0.216 |
| BL6a | 0.373 | 0.621 |
| BXD01 | -0.177 | -0.816 |
| BXD010 | -0.516 | -1.384 |
| BXD011 | -0.745 | -0.454 |
| BXD03 | -0.678 | -0.775 |
| BXD04 | -0.159 | -0.67 |
| BXD05 | -0.408 | 0.262 |
| BXD06 | -0.26 | -0.684 |
| BXD07 | -0.102 | -0.591 |
| BXD08 | -0.621 | -1.098 |
| BXD09 | -0.657 | -0.632 |
| CAST | 0.158 | 0.994 |
| CCcont | 0.093 | -0.223 |
| DS01 | -0.342 | 0.139 |
| DS02 | 0.12 | 0.058 |
| DS04 | 0.067 | 0.798 |
| DS0c | 0.641 | 0.14 |
| GP01 | -1.222 | -0.54 |
| GP02 | 0.382 | 0.906 |
| GP0c | -0.177 | -0.132 |
| NOD | -0.049 | -0.125 |
| NZO | -0.043 | -0.137 |
| PWK | -0.467 | -0.266 |
| H37Rv_KO_CtpC | -0.93 | -0.586 |
| H37Rv_KO_CtpD | 0.809 | 0.544 |
| H37Rv_KO_Rv1272 | -0.336 | 0.374 |
| H37Rv_KO_SugABC | -0.127 | 1.571 |
| H37Rv_KO_MbtN | -1.826 | -2.531 |
| Trans05 | -1.073 | -0.833 |
| macrophage_unactivated | -0.262 | -1.171 |
| IL1 | 0.119 | -0.362 |
| Rapamycin | 0.04 | 0.512 |
| Tcell | -0.179 | 0.16 |
| GMCSF | 0.309 | -0.795 |
| IFNab | 0.747 | -0.051 |
| IFNg | -0.184 | 0.628 |
| IFNg_GMCSF1 | 0.443 | -0.779 |
| Rv1432_day32 | -0.222 | 1.091 |
| Rv1565c_day32 | 1.374 | -0.338 |
| secA2_input | -0.047 | 0.313 |
| delta_Rv3594 | 1.332 | 0.89 |
| delta_Rv3717 | 1.016 | 0.029 |
| delta_Rv3811 | 0.965 | 0.851 |
| delta_Rv0954 | 1.302 | 1.058 |
| PonA1 | -0.223 | 0.754 |
| EccD1_KO | 1.371 | 0.931 |
| EspI_KO | -0.257 | -0.391 |
| PE35_KO | 0.248 | -0.125 |
| PPE68_KO | 0.387 | -0.691 |
| glycerol2 | 0.972 | 0.782 |
| lignocerate | 0.519 | 1.975 |
| oleate | -0.601 | -2.597 |
| phosphatidylcholine | 0.224 | 0.857 |
| acetate | 0.091 | 1.729 |
| glucAc | 0.662 | 1.403 |
| Rv0950ko | 0.277 | 0.259 |
| Rv1096ko | 1.179 | 0.971 |
| Rv3684ko | 1.009 | 0.039 |
| delta_otsA_trehalose | 0.725 | 1.484 |