Top 10 genes with highest correlation to Rv3668c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0007/- | (cc=0.5181) | info on Rv0007/- |
| Rv3086/adhD | (cc=0.499) | info on Rv3086/adhD |
| Rv0314c/- | (cc=0.4744) | info on Rv0314c/- |
| Rv2594c/ruvC | (cc=0.4737) | info on Rv2594c/ruvC |
| Rv0995/rimJ | (cc=0.4721) | info on Rv0995/rimJ |
| Rv2171/lppM | (cc=0.4678) | info on Rv2171/lppM |
| Rv0656c/vapC6 | (cc=0.4526) | info on Rv0656c/vapC6 |
| Rv0132c/fgd2 | (cc=0.4523) | info on Rv0132c/fgd2 |
| Rv0994/moeA1 | (cc=0.4491) | info on Rv0994/moeA1 |
| Rv0361/- | (cc=0.4425) | info on Rv0361/- |
Correlation of Rv3668c/- with Rv0314c/-
Normalized LFCs for Rv3668c/-:
(description and provenance of datasets)
| Rv3668c/- | Rv0314c/- | |
| Fe_supp_jason_reseq | -0.612 | 0.336 |
| low_pH_jason_reseq | -1.071 | -0.637 |
| NO_jason_reseq | 0.037 | -0.074 |
| B6_jason_reseq | -0.297 | -0.548 |
| MHCII_jason_reseq | -0.082 | 1.058 |
| Isoniazid02 | -0.167 | -1.561 |
| Rifampicin4 | -2.767 | -1.048 |
| Ethambutol3 | -0.862 | -0.263 |
| Meropenem3 | -1.266 | -2.337 |
| Vancomycin16 | -1.22 | -1.706 |
| Rv2680_day32 | 1.287 | 0.425 |
| H37Rv_KO_MarP | 0.454 | -0.631 |
| hypoxia_3wks | 0.0 | -0.267 |
| hypoxia_6wks | -0.666 | -0.048 |
| glycerol | -0.149 | -0.464 |
| cholesterol | 1.1 | -0.291 |
| AJ | 0.324 | 0.042 |
| Bibs02 | -0.31 | 0.179 |
| Bibs02c | 0.199 | 0.165 |
| BL6 | 0.603 | 0.603 |
| BL6a | 0.373 | -0.169 |
| BXD01 | -0.177 | -0.177 |
| BXD010 | -0.516 | -0.332 |
| BXD011 | -0.745 | -0.519 |
| BXD03 | -0.678 | 0.312 |
| BXD04 | -0.159 | -0.318 |
| BXD05 | -0.408 | -0.474 |
| BXD06 | -0.26 | -0.614 |
| BXD07 | -0.102 | 0.114 |
| BXD08 | -0.621 | -0.455 |
| BXD09 | -0.657 | -0.604 |
| CAST | 0.158 | -0.614 |
| CCcont | 0.093 | 0.257 |
| DS01 | -0.342 | -0.956 |
| DS02 | 0.12 | -0.38 |
| DS04 | 0.067 | -0.708 |
| DS0c | 0.641 | -0.305 |
| GP01 | -1.222 | -0.202 |
| GP02 | 0.382 | 0.66 |
| GP0c | -0.177 | -0.237 |
| NOD | -0.049 | 0.132 |
| NZO | -0.043 | 0.887 |
| PWK | -0.467 | 0.014 |
| H37Rv_KO_CtpC | -0.93 | 0.153 |
| H37Rv_KO_CtpD | 0.809 | -0.05 |
| H37Rv_KO_Rv1272 | -0.336 | -1.699 |
| H37Rv_KO_SugABC | -0.127 | -0.431 |
| H37Rv_KO_MbtN | -1.826 | -0.369 |
| Trans05 | -1.073 | -1.252 |
| macrophage_unactivated | -0.262 | 0.325 |
| IL1 | 0.119 | -0.329 |
| Rapamycin | 0.04 | -0.374 |
| Tcell | -0.179 | -0.502 |
| GMCSF | 0.309 | 0.602 |
| IFNab | 0.747 | -0.599 |
| IFNg | -0.184 | -0.091 |
| IFNg_GMCSF1 | 0.443 | 0.239 |
| Rv1432_day32 | -0.222 | -0.433 |
| Rv1565c_day32 | 1.374 | 0.507 |
| secA2_input | -0.047 | 0.651 |
| delta_Rv3594 | 1.332 | -0.528 |
| delta_Rv3717 | 1.016 | -0.346 |
| delta_Rv3811 | 0.965 | 0.079 |
| delta_Rv0954 | 1.302 | 0.488 |
| PonA1 | -0.223 | -0.412 |
| EccD1_KO | 1.371 | 0.253 |
| EspI_KO | -0.257 | 0.128 |
| PE35_KO | 0.248 | 0.125 |
| PPE68_KO | 0.387 | 0.128 |
| glycerol2 | 0.972 | 0.722 |
| lignocerate | 0.519 | 0.943 |
| oleate | -0.601 | 0.098 |
| phosphatidylcholine | 0.224 | 0.852 |
| acetate | 0.091 | 0.045 |
| glucAc | 0.662 | 0.18 |
| Rv0950ko | 0.277 | 0.781 |
| Rv1096ko | 1.179 | 0.618 |
| Rv3684ko | 1.009 | 0.55 |
| delta_otsA_trehalose | 0.725 | 0.222 |