Top 10 genes with highest correlation to Rv3668c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0007/- | (cc=0.5181) | info on Rv0007/- |
| Rv3086/adhD | (cc=0.499) | info on Rv3086/adhD |
| Rv0314c/- | (cc=0.4744) | info on Rv0314c/- |
| Rv2594c/ruvC | (cc=0.4737) | info on Rv2594c/ruvC |
| Rv0995/rimJ | (cc=0.4721) | info on Rv0995/rimJ |
| Rv2171/lppM | (cc=0.4678) | info on Rv2171/lppM |
| Rv0656c/vapC6 | (cc=0.4526) | info on Rv0656c/vapC6 |
| Rv0132c/fgd2 | (cc=0.4523) | info on Rv0132c/fgd2 |
| Rv0994/moeA1 | (cc=0.4491) | info on Rv0994/moeA1 |
| Rv0361/- | (cc=0.4425) | info on Rv0361/- |
Correlation of Rv3668c/- with Rv0007/-
Normalized LFCs for Rv3668c/-:
(description and provenance of datasets)
| Rv3668c/- | Rv0007/- | |
| Fe_supp_jason_reseq | -0.612 | 1.163 |
| low_pH_jason_reseq | -1.071 | -0.539 |
| NO_jason_reseq | 0.037 | -0.845 |
| B6_jason_reseq | -0.297 | -0.229 |
| MHCII_jason_reseq | -0.082 | 0.603 |
| Isoniazid02 | -0.167 | -0.535 |
| Rifampicin4 | -2.767 | -6.0 |
| Ethambutol3 | -0.862 | -0.824 |
| Meropenem3 | -1.266 | -3.279 |
| Vancomycin16 | -1.22 | -5.709 |
| Rv2680_day32 | 1.287 | -0.595 |
| H37Rv_KO_MarP | 0.454 | 1.208 |
| hypoxia_3wks | 0.0 | -2.644 |
| hypoxia_6wks | -0.666 | -3.733 |
| glycerol | -0.149 | -0.762 |
| cholesterol | 1.1 | 0.688 |
| AJ | 0.324 | -0.876 |
| Bibs02 | -0.31 | -0.775 |
| Bibs02c | 0.199 | 0.129 |
| BL6 | 0.603 | 1.282 |
| BL6a | 0.373 | -0.659 |
| BXD01 | -0.177 | -0.615 |
| BXD010 | -0.516 | -1.598 |
| BXD011 | -0.745 | -0.666 |
| BXD03 | -0.678 | -1.429 |
| BXD04 | -0.159 | -1.307 |
| BXD05 | -0.408 | -1.109 |
| BXD06 | -0.26 | -1.533 |
| BXD07 | -0.102 | -1.241 |
| BXD08 | -0.621 | -1.527 |
| BXD09 | -0.657 | -0.295 |
| CAST | 0.158 | -2.644 |
| CCcont | 0.093 | 1.962 |
| DS01 | -0.342 | -1.637 |
| DS02 | 0.12 | -0.821 |
| DS04 | 0.067 | -0.408 |
| DS0c | 0.641 | -0.372 |
| GP01 | -1.222 | 0.031 |
| GP02 | 0.382 | -0.955 |
| GP0c | -0.177 | -0.75 |
| NOD | -0.049 | -2.013 |
| NZO | -0.043 | -0.269 |
| PWK | -0.467 | -1.91 |
| H37Rv_KO_CtpC | -0.93 | -0.85 |
| H37Rv_KO_CtpD | 0.809 | -0.537 |
| H37Rv_KO_Rv1272 | -0.336 | -1.163 |
| H37Rv_KO_SugABC | -0.127 | -0.518 |
| H37Rv_KO_MbtN | -1.826 | 0.404 |
| Trans05 | -1.073 | -0.683 |
| macrophage_unactivated | -0.262 | -0.161 |
| IL1 | 0.119 | -0.635 |
| Rapamycin | 0.04 | -0.838 |
| Tcell | -0.179 | -0.336 |
| GMCSF | 0.309 | -0.882 |
| IFNab | 0.747 | 0.0 |
| IFNg | -0.184 | -1.066 |
| IFNg_GMCSF1 | 0.443 | 0.0 |
| Rv1432_day32 | -0.222 | -0.18 |
| Rv1565c_day32 | 1.374 | 6.0 |
| secA2_input | -0.047 | -0.65 |
| delta_Rv3594 | 1.332 | 1.193 |
| delta_Rv3717 | 1.016 | 0.115 |
| delta_Rv3811 | 0.965 | 0.99 |
| delta_Rv0954 | 1.302 | 1.81 |
| PonA1 | -0.223 | -3.696 |
| EccD1_KO | 1.371 | -1.842 |
| EspI_KO | -0.257 | -1.705 |
| PE35_KO | 0.248 | -0.817 |
| PPE68_KO | 0.387 | 0.019 |
| glycerol2 | 0.972 | -1.369 |
| lignocerate | 0.519 | -1.084 |
| oleate | -0.601 | -2.451 |
| phosphatidylcholine | 0.224 | -2.422 |
| acetate | 0.091 | 0.286 |
| glucAc | 0.662 | -0.176 |
| Rv0950ko | 0.277 | -1.342 |
| Rv1096ko | 1.179 | -0.965 |
| Rv3684ko | 1.009 | 0.986 |
| delta_otsA_trehalose | 0.725 | -0.576 |