Top 10 genes with highest correlation to Rv3667/acs:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0425c/ctpH | (cc=0.5582) | info on Rv0425c/ctpH |
| Rv1683/- | (cc=0.5409) | info on Rv1683/- |
| Rv2185c/TB16.3 | (cc=0.5394) | info on Rv2185c/TB16.3 |
| Rv1925/fadD31 | (cc=0.5341) | info on Rv1925/fadD31 |
| Rv0645c/mmaA1 | (cc=0.5272) | info on Rv0645c/mmaA1 |
| Rv1805c/- | (cc=0.525) | info on Rv1805c/- |
| Rv3837c/- | (cc=0.5219) | info on Rv3837c/- |
| Rv3814c/- | (cc=0.5087) | info on Rv3814c/- |
| Rv3148/nuoD | (cc=0.4969) | info on Rv3148/nuoD |
| Rv0211/pckA | (cc=0.4944) | info on Rv0211/pckA |
Correlation of Rv3667/acs with Rv0211/pckA
Normalized LFCs for Rv3667/acs:
(description and provenance of datasets)
| Rv3667/acs | Rv0211/pckA | |
| Fe_supp_jason_reseq | -0.065 | -0.077 |
| low_pH_jason_reseq | -0.341 | 3.701 |
| NO_jason_reseq | -0.882 | 0.995 |
| B6_jason_reseq | 0.172 | -1.221 |
| MHCII_jason_reseq | -0.04 | -0.572 |
| Isoniazid02 | 0.439 | 3.796 |
| Rifampicin4 | -1.11 | -0.918 |
| Ethambutol3 | -0.629 | 1.451 |
| Meropenem3 | 0.042 | 1.394 |
| Vancomycin16 | -0.647 | -1.09 |
| Rv2680_day32 | 0.406 | 2.055 |
| H37Rv_KO_MarP | 0.831 | 2.318 |
| hypoxia_3wks | -0.195 | -1.388 |
| hypoxia_6wks | 0.505 | -0.52 |
| glycerol | -0.088 | 0.353 |
| cholesterol | 0.689 | 0.132 |
| AJ | 0.116 | -0.232 |
| Bibs02 | -0.23 | 0.592 |
| Bibs02c | 0.121 | 0.191 |
| BL6 | 1.023 | 3.646 |
| BL6a | 0.505 | 3.405 |
| BXD01 | 1.42 | 4.202 |
| BXD010 | 0.631 | 4.081 |
| BXD011 | 0.654 | 2.501 |
| BXD03 | 0.499 | 1.595 |
| BXD04 | 0.388 | 3.799 |
| BXD05 | 0.641 | 2.859 |
| BXD06 | 0.903 | 3.508 |
| BXD07 | 0.835 | 3.945 |
| BXD08 | 0.77 | 3.31 |
| BXD09 | 0.543 | 4.4 |
| CAST | 0.477 | 0.0 |
| CCcont | 0.551 | 4.226 |
| DS01 | 0.371 | 0.0 |
| DS02 | 0.358 | -0.217 |
| DS04 | 0.319 | 2.347 |
| DS0c | 0.734 | -0.217 |
| GP01 | 0.448 | 1.98 |
| GP02 | 0.137 | 0.428 |
| GP0c | -0.068 | 1.573 |
| NOD | -0.35 | -0.225 |
| NZO | 0.163 | -0.199 |
| PWK | 0.365 | -0.196 |
| H37Rv_KO_CtpC | -0.568 | 2.502 |
| H37Rv_KO_CtpD | -0.16 | 0.41 |
| H37Rv_KO_Rv1272 | 0.553 | 2.549 |
| H37Rv_KO_SugABC | 0.81 | 3.482 |
| H37Rv_KO_MbtN | 0.485 | 5.462 |
| Trans05 | 0.866 | 1.37 |
| macrophage_unactivated | -0.158 | -4.558 |
| IL1 | 0.353 | -3.954 |
| Rapamycin | 0.525 | -3.133 |
| Tcell | 0.313 | -4.255 |
| GMCSF | -0.066 | -3.736 |
| IFNab | -0.308 | 1.173 |
| IFNg | -0.045 | -4.816 |
| IFNg_GMCSF1 | 0.05 | -3.488 |
| Rv1432_day32 | 1.145 | -0.18 |
| Rv1565c_day32 | -0.144 | 0.0 |
| secA2_input | 0.872 | 1.462 |
| delta_Rv3594 | 0.109 | 2.666 |
| delta_Rv3717 | 0.886 | 3.211 |
| delta_Rv3811 | 0.706 | 3.044 |
| delta_Rv0954 | -0.603 | -4.521 |
| PonA1 | 0.159 | -5.327 |
| EccD1_KO | -0.464 | -4.976 |
| EspI_KO | -0.653 | -4.885 |
| PE35_KO | -0.601 | -3.503 |
| PPE68_KO | -0.698 | -4.217 |
| glycerol2 | 2.044 | 3.892 |
| lignocerate | 0.0 | 1.154 |
| oleate | 0.713 | 0.57 |
| phosphatidylcholine | 0.496 | 0.14 |
| acetate | 0.973 | 0.085 |
| glucAc | 1.35 | 0.569 |
| Rv0950ko | -0.398 | -4.472 |
| Rv1096ko | -0.175 | -6.0 |
| Rv3684ko | 0.291 | -5.941 |
| delta_otsA_trehalose | -0.22 | -0.276 |