Top 10 genes with highest correlation to Rv3658c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0619/galTb | (cc=0.4425) | info on Rv0619/galTb |
| Rv3565/aspB | (cc=0.4249) | info on Rv3565/aspB |
| Rv3438/- | (cc=0.4106) | info on Rv3438/- |
| Rv3043c/ctaD | (cc=0.4068) | info on Rv3043c/ctaD |
| Rv3489/- | (cc=0.4013) | info on Rv3489/- |
| Rv0665/vapC8 | (cc=0.3982) | info on Rv0665/vapC8 |
| Rv1365c/rsfA | (cc=0.3935) | info on Rv1365c/rsfA |
| Rv2849c/cobO | (cc=0.3885) | info on Rv2849c/cobO |
| Rv3705c/- | (cc=0.3867) | info on Rv3705c/- |
| Rv3793/embC | (cc=0.3857) | info on Rv3793/embC |
Correlation of Rv3658c/- with Rv0665/vapC8
Normalized LFCs for Rv3658c/-:
(description and provenance of datasets)
| Rv3658c/- | Rv0665/vapC8 | |
| Fe_supp_jason_reseq | 1.08 | 1.405 |
| low_pH_jason_reseq | 0.341 | 0.33 |
| NO_jason_reseq | -0.116 | 0.557 |
| B6_jason_reseq | 0.347 | -0.527 |
| MHCII_jason_reseq | 0.934 | 0.266 |
| Isoniazid02 | -0.215 | -0.578 |
| Rifampicin4 | 1.148 | -1.66 |
| Ethambutol3 | 0.084 | -0.597 |
| Meropenem3 | 0.476 | 2.589 |
| Vancomycin16 | 0.682 | 0.451 |
| Rv2680_day32 | 0.244 | 0.907 |
| H37Rv_KO_MarP | 0.549 | 0.487 |
| hypoxia_3wks | 0.291 | -0.303 |
| hypoxia_6wks | -1.222 | -0.023 |
| glycerol | 0.26 | -1.404 |
| cholesterol | -0.156 | 3.47 |
| AJ | -1.489 | 0.0 |
| Bibs02 | 0.494 | -0.289 |
| Bibs02c | -0.815 | -1.578 |
| BL6 | 0.659 | 1.115 |
| BL6a | 0.663 | -0.452 |
| BXD01 | 0.0 | 0.122 |
| BXD010 | 0.276 | 1.019 |
| BXD011 | 0.394 | 0.269 |
| BXD03 | 1.174 | 0.487 |
| BXD04 | -0.022 | -0.013 |
| BXD05 | 0.578 | 0.274 |
| BXD06 | 0.797 | 0.844 |
| BXD07 | 0.84 | 0.712 |
| BXD08 | 0.462 | 0.567 |
| BXD09 | 1.077 | 0.308 |
| CAST | 0.297 | -0.138 |
| CCcont | 1.262 | 1.188 |
| DS01 | -0.041 | -0.512 |
| DS02 | 0.699 | 0.46 |
| DS04 | 0.649 | -0.832 |
| DS0c | 0.247 | 0.544 |
| GP01 | 0.468 | 1.181 |
| GP02 | -0.848 | 1.351 |
| GP0c | 0.044 | 0.189 |
| NOD | -1.238 | -0.742 |
| NZO | -0.069 | -1.241 |
| PWK | -0.669 | -0.675 |
| H37Rv_KO_CtpC | -0.175 | -0.352 |
| H37Rv_KO_CtpD | 0.105 | 0.037 |
| H37Rv_KO_Rv1272 | -0.1 | -0.735 |
| H37Rv_KO_SugABC | -1.6 | -1.967 |
| H37Rv_KO_MbtN | -0.538 | 0.123 |
| Trans05 | -0.646 | 0.156 |
| macrophage_unactivated | -0.915 | -0.357 |
| IL1 | 0.851 | 0.537 |
| Rapamycin | 0.445 | 1.691 |
| Tcell | -0.143 | 0.189 |
| GMCSF | 1.582 | -0.135 |
| IFNab | 0.84 | 0.457 |
| IFNg | 0.227 | 0.543 |
| IFNg_GMCSF1 | 0.927 | 0.839 |
| Rv1432_day32 | 0.0 | -3.533 |
| Rv1565c_day32 | 0.404 | 0.813 |
| secA2_input | 0.704 | 0.953 |
| delta_Rv3594 | -0.321 | -2.002 |
| delta_Rv3717 | 0.091 | -1.209 |
| delta_Rv3811 | 0.174 | -0.364 |
| delta_Rv0954 | 0.659 | 0.084 |
| PonA1 | 1.289 | 1.383 |
| EccD1_KO | -0.602 | -2.223 |
| EspI_KO | 0.465 | -0.984 |
| PE35_KO | -1.068 | -1.561 |
| PPE68_KO | -0.995 | -1.219 |
| glycerol2 | -1.033 | -0.517 |
| lignocerate | -0.448 | -0.138 |
| oleate | -1.131 | -0.798 |
| phosphatidylcholine | -0.721 | -0.478 |
| acetate | -0.637 | -0.111 |
| glucAc | -0.257 | 0.475 |
| Rv0950ko | -0.669 | -0.769 |
| Rv1096ko | -0.567 | -0.452 |
| Rv3684ko | 0.878 | 0.131 |
| delta_otsA_trehalose | -0.336 | -0.315 |