Top 10 genes with highest correlation to Rv3643/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0008c/- | (cc=0.633) | info on Rv0008c/- |
Rv1045/- | (cc=0.6289) | info on Rv1045/- |
Rv0089/- | (cc=0.587) | info on Rv0089/- |
Rv1834/lipZ | (cc=0.5426) | info on Rv1834/lipZ |
Rv3353c/- | (cc=0.5401) | info on Rv3353c/- |
Rv2323c/- | (cc=0.5341) | info on Rv2323c/- |
Rv3295/- | (cc=0.534) | info on Rv3295/- |
Rv2638/- | (cc=0.5289) | info on Rv2638/- |
Rv3059/cyp136 | (cc=0.5163) | info on Rv3059/cyp136 |
Rv3294c/- | (cc=0.5147) | info on Rv3294c/- |
Correlation of Rv3643/- with Rv0089/-
Normalized LFCs for Rv3643/-:
(description and provenance of datasets)
Rv3643/- | Rv0089/- | |
Fe_supp_jason_reseq | 0.011 | -0.617 |
low_pH_jason_reseq | -0.612 | -0.221 |
NO_jason_reseq | -0.378 | 0.047 |
B6_jason_reseq | -0.87 | 0.241 |
MHCII_jason_reseq | 0.147 | 0.487 |
Isoniazid02 | -0.013 | 0.877 |
Rifampicin4 | -0.988 | -0.701 |
Ethambutol3 | -0.124 | -0.483 |
Meropenem3 | -0.145 | -0.564 |
Vancomycin16 | -1.093 | 0.0 |
Rv2680_day32 | 0.824 | 1.554 |
H37Rv_KO_MarP | 0.23 | 1.943 |
hypoxia_3wks | -0.821 | -0.59 |
hypoxia_6wks | 0.288 | -0.699 |
glycerol | -2.424 | -1.188 |
cholesterol | -0.858 | -0.61 |
AJ | -0.602 | 0.069 |
Bibs02 | -0.06 | 0.098 |
Bibs02c | -0.508 | 0.0 |
BL6 | -0.906 | -1.724 |
BL6a | -1.884 | -1.411 |
BXD01 | -3.35 | -1.681 |
BXD010 | -2.188 | -1.478 |
BXD011 | -1.273 | -1.727 |
BXD03 | -1.597 | -1.397 |
BXD04 | -1.46 | -0.973 |
BXD05 | -2.02 | -1.529 |
BXD06 | -1.867 | -1.642 |
BXD07 | -2.116 | -2.006 |
BXD08 | -1.962 | -2.382 |
BXD09 | -2.596 | -1.596 |
CAST | 0.502 | 0.492 |
CCcont | -1.763 | -0.977 |
DS01 | -0.517 | -0.209 |
DS02 | -1.66 | 0.153 |
DS04 | -0.72 | 0.462 |
DS0c | -0.825 | 0.308 |
GP01 | 0.899 | 0.326 |
GP02 | -0.635 | -1.336 |
GP0c | -0.893 | -0.489 |
NOD | 0.913 | 0.145 |
NZO | -0.228 | -0.1 |
PWK | -0.051 | 0.389 |
H37Rv_KO_CtpC | 0.743 | -1.138 |
H37Rv_KO_CtpD | 0.584 | -3.064 |
H37Rv_KO_Rv1272 | 0.129 | -0.742 |
H37Rv_KO_SugABC | -0.668 | -0.481 |
H37Rv_KO_MbtN | -0.577 | -1.571 |
Trans05 | 0.645 | 0.008 |
macrophage_unactivated | -1.521 | -2.727 |
IL1 | -1.43 | -1.246 |
Rapamycin | -1.043 | -2.071 |
Tcell | -1.571 | -1.3 |
GMCSF | -1.761 | -1.848 |
IFNab | -0.698 | -2.524 |
IFNg | -2.534 | -1.871 |
IFNg_GMCSF1 | -1.515 | -0.936 |
Rv1432_day32 | -0.249 | 0.301 |
Rv1565c_day32 | 0.878 | 0.594 |
secA2_input | -2.052 | -1.028 |
delta_Rv3594 | -1.049 | 0.0 |
delta_Rv3717 | -0.557 | -0.216 |
delta_Rv3811 | -1.518 | 0.755 |
delta_Rv0954 | 0.013 | 0.442 |
PonA1 | 0.419 | -0.308 |
EccD1_KO | -1.437 | -0.118 |
EspI_KO | -2.125 | 1.221 |
PE35_KO | -0.904 | 0.204 |
PPE68_KO | -0.928 | 1.497 |
glycerol2 | 0.369 | 1.494 |
lignocerate | 1.303 | 1.736 |
oleate | 0.196 | -0.505 |
phosphatidylcholine | 0.531 | 1.304 |
acetate | 2.635 | 2.168 |
glucAc | 0.792 | 1.508 |
Rv0950ko | -0.292 | -0.169 |
Rv1096ko | -0.639 | 0.983 |
Rv3684ko | -0.485 | 1.019 |
delta_otsA_trehalose | 1.977 | 1.304 |