Top 10 genes with highest correlation to Rv3636/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0446c/- | (cc=0.474) | info on Rv0446c/- |
| Rv0926c/- | (cc=0.4461) | info on Rv0926c/- |
| Rv0557/mgtA | (cc=0.4454) | info on Rv0557/mgtA |
| Rv3739c/PPE67 | (cc=0.4134) | info on Rv3739c/PPE67 |
| Rv0811c/- | (cc=0.4134) | info on Rv0811c/- |
| Rv1191/- | (cc=0.4036) | info on Rv1191/- |
| Rv3561/fadD3 | (cc=0.4023) | info on Rv3561/fadD3 |
| Rv3521/- | (cc=0.3937) | info on Rv3521/- |
| Rv0117/oxyS | (cc=0.3881) | info on Rv0117/oxyS |
| Rv3761c/fadE36 | (cc=0.3846) | info on Rv3761c/fadE36 |
Correlation of Rv3636/- with Rv0557/mgtA
Normalized LFCs for Rv3636/-:
(description and provenance of datasets)
| Rv3636/- | Rv0557/mgtA | |
| Fe_supp_jason_reseq | 0.559 | 0.0 |
| low_pH_jason_reseq | -0.032 | 0.341 |
| NO_jason_reseq | 1.391 | -0.488 |
| B6_jason_reseq | 0.093 | 0.532 |
| MHCII_jason_reseq | 0.991 | -0.232 |
| Isoniazid02 | 0.288 | 0.65 |
| Rifampicin4 | 0.707 | 0.173 |
| Ethambutol3 | 0.136 | 0.423 |
| Meropenem3 | 1.744 | -0.254 |
| Vancomycin16 | 0.875 | 1.313 |
| Rv2680_day32 | -2.621 | -2.937 |
| H37Rv_KO_MarP | 0.831 | 0.94 |
| hypoxia_3wks | 0.315 | 0.207 |
| hypoxia_6wks | -0.453 | -0.474 |
| glycerol | 1.059 | 0.275 |
| cholesterol | -0.057 | 0.478 |
| AJ | 0.977 | -0.237 |
| Bibs02 | -0.766 | -1.462 |
| Bibs02c | -0.418 | -0.579 |
| BL6 | -0.488 | 0.58 |
| BL6a | -0.284 | -0.611 |
| BXD01 | 0.873 | -0.065 |
| BXD010 | 0.852 | -0.315 |
| BXD011 | 0.591 | -0.571 |
| BXD03 | -0.509 | -0.606 |
| BXD04 | -0.012 | 0.341 |
| BXD05 | 0.331 | 0.064 |
| BXD06 | 0.349 | -0.456 |
| BXD07 | 0.864 | 0.482 |
| BXD08 | 0.585 | 0.093 |
| BXD09 | 0.336 | -0.181 |
| CAST | -0.232 | 0.881 |
| CCcont | -0.231 | -0.785 |
| DS01 | 0.195 | -0.371 |
| DS02 | 0.274 | 0.432 |
| DS04 | 0.357 | 0.676 |
| DS0c | -0.385 | 0.152 |
| GP01 | -0.386 | -0.049 |
| GP02 | 0.451 | -0.916 |
| GP0c | 0.798 | -0.489 |
| NOD | -1.362 | 0.158 |
| NZO | 1.445 | -0.552 |
| PWK | 1.017 | -0.148 |
| H37Rv_KO_CtpC | 0.246 | -0.611 |
| H37Rv_KO_CtpD | 0.36 | -1.689 |
| H37Rv_KO_Rv1272 | 0.909 | 1.105 |
| H37Rv_KO_SugABC | 0.206 | -0.408 |
| H37Rv_KO_MbtN | 0.407 | -1.289 |
| Trans05 | 1.694 | -1.862 |
| macrophage_unactivated | -0.041 | 1.405 |
| IL1 | 0.62 | -0.641 |
| Rapamycin | 0.979 | 0.577 |
| Tcell | 0.492 | 0.495 |
| GMCSF | 0.301 | -0.333 |
| IFNab | -0.248 | -0.248 |
| IFNg | 0.853 | 0.208 |
| IFNg_GMCSF1 | 1.295 | 1.112 |
| Rv1432_day32 | -0.18 | 0.0 |
| Rv1565c_day32 | 0.329 | -0.381 |
| secA2_input | -0.675 | -0.521 |
| delta_Rv3594 | -1.104 | -1.75 |
| delta_Rv3717 | -0.106 | -0.941 |
| delta_Rv3811 | -0.462 | -1.029 |
| delta_Rv0954 | 0.49 | 0.129 |
| PonA1 | -0.021 | -0.799 |
| EccD1_KO | -0.335 | 0.0 |
| EspI_KO | 0.251 | 0.55 |
| PE35_KO | 0.172 | 0.0 |
| PPE68_KO | 0.096 | 1.161 |
| glycerol2 | 0.097 | -0.311 |
| lignocerate | -0.077 | -1.161 |
| oleate | 0.62 | 0.213 |
| phosphatidylcholine | 0.06 | -0.391 |
| acetate | -0.432 | -1.297 |
| glucAc | -0.582 | -2.417 |
| Rv0950ko | 0.938 | 0.0 |
| Rv1096ko | 2.129 | 1.65 |
| Rv3684ko | 1.634 | 1.536 |
| delta_otsA_trehalose | -1.138 | -0.807 |