Top 10 genes with highest correlation to Rv3636/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0446c/- | (cc=0.474) | info on Rv0446c/- |
| Rv0926c/- | (cc=0.4461) | info on Rv0926c/- |
| Rv0557/mgtA | (cc=0.4454) | info on Rv0557/mgtA |
| Rv3739c/PPE67 | (cc=0.4134) | info on Rv3739c/PPE67 |
| Rv0811c/- | (cc=0.4134) | info on Rv0811c/- |
| Rv1191/- | (cc=0.4036) | info on Rv1191/- |
| Rv3561/fadD3 | (cc=0.4023) | info on Rv3561/fadD3 |
| Rv3521/- | (cc=0.3937) | info on Rv3521/- |
| Rv0117/oxyS | (cc=0.3881) | info on Rv0117/oxyS |
| Rv3761c/fadE36 | (cc=0.3846) | info on Rv3761c/fadE36 |
Correlation of Rv3636/- with Rv0117/oxyS
Normalized LFCs for Rv3636/-:
(description and provenance of datasets)
| Rv3636/- | Rv0117/oxyS | |
| Fe_supp_jason_reseq | 0.559 | 0.025 |
| low_pH_jason_reseq | -0.032 | -0.423 |
| NO_jason_reseq | 1.391 | -0.99 |
| B6_jason_reseq | 0.093 | -0.517 |
| MHCII_jason_reseq | 0.991 | 0.691 |
| Isoniazid02 | 0.288 | 0.051 |
| Rifampicin4 | 0.707 | -0.352 |
| Ethambutol3 | 0.136 | 0.022 |
| Meropenem3 | 1.744 | 1.848 |
| Vancomycin16 | 0.875 | 0.273 |
| Rv2680_day32 | -2.621 | -2.003 |
| H37Rv_KO_MarP | 0.831 | 0.12 |
| hypoxia_3wks | 0.315 | -0.056 |
| hypoxia_6wks | -0.453 | 0.167 |
| glycerol | 1.059 | -1.463 |
| cholesterol | -0.057 | -1.51 |
| AJ | 0.977 | -0.963 |
| Bibs02 | -0.766 | -1.522 |
| Bibs02c | -0.418 | -1.214 |
| BL6 | -0.488 | -1.878 |
| BL6a | -0.284 | -1.179 |
| BXD01 | 0.873 | -1.084 |
| BXD010 | 0.852 | -0.056 |
| BXD011 | 0.591 | -1.701 |
| BXD03 | -0.509 | -0.785 |
| BXD04 | -0.012 | -0.206 |
| BXD05 | 0.331 | -1.927 |
| BXD06 | 0.349 | -1.013 |
| BXD07 | 0.864 | -1.32 |
| BXD08 | 0.585 | -1.185 |
| BXD09 | 0.336 | -1.197 |
| CAST | -0.232 | -0.732 |
| CCcont | -0.231 | -0.936 |
| DS01 | 0.195 | -0.125 |
| DS02 | 0.274 | -0.498 |
| DS04 | 0.357 | -0.343 |
| DS0c | -0.385 | 0.091 |
| GP01 | -0.386 | 0.2 |
| GP02 | 0.451 | -1.014 |
| GP0c | 0.798 | -0.574 |
| NOD | -1.362 | -0.714 |
| NZO | 1.445 | 0.181 |
| PWK | 1.017 | -0.578 |
| H37Rv_KO_CtpC | 0.246 | -0.896 |
| H37Rv_KO_CtpD | 0.36 | 0.654 |
| H37Rv_KO_Rv1272 | 0.909 | -0.928 |
| H37Rv_KO_SugABC | 0.206 | -0.107 |
| H37Rv_KO_MbtN | 0.407 | -0.214 |
| Trans05 | 1.694 | -0.576 |
| macrophage_unactivated | -0.041 | -0.29 |
| IL1 | 0.62 | -0.273 |
| Rapamycin | 0.979 | -0.353 |
| Tcell | 0.492 | -0.222 |
| GMCSF | 0.301 | -0.119 |
| IFNab | -0.248 | -0.206 |
| IFNg | 0.853 | -0.246 |
| IFNg_GMCSF1 | 1.295 | 0.204 |
| Rv1432_day32 | -0.18 | -0.945 |
| Rv1565c_day32 | 0.329 | 0.39 |
| secA2_input | -0.675 | 0.847 |
| delta_Rv3594 | -1.104 | -1.091 |
| delta_Rv3717 | -0.106 | -0.571 |
| delta_Rv3811 | -0.462 | -0.923 |
| delta_Rv0954 | 0.49 | -0.037 |
| PonA1 | -0.021 | -0.31 |
| EccD1_KO | -0.335 | -0.756 |
| EspI_KO | 0.251 | 0.536 |
| PE35_KO | 0.172 | -0.747 |
| PPE68_KO | 0.096 | -0.531 |
| glycerol2 | 0.097 | -0.015 |
| lignocerate | -0.077 | -0.527 |
| oleate | 0.62 | 0.36 |
| phosphatidylcholine | 0.06 | -0.307 |
| acetate | -0.432 | -0.894 |
| glucAc | -0.582 | -0.493 |
| Rv0950ko | 0.938 | 0.47 |
| Rv1096ko | 2.129 | 0.0 |
| Rv3684ko | 1.634 | 0.429 |
| delta_otsA_trehalose | -1.138 | -1.644 |