Top 10 genes with highest correlation to Rv3636/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0446c/- | (cc=0.474) | info on Rv0446c/- |
| Rv0926c/- | (cc=0.4461) | info on Rv0926c/- |
| Rv0557/mgtA | (cc=0.4454) | info on Rv0557/mgtA |
| Rv3739c/PPE67 | (cc=0.4134) | info on Rv3739c/PPE67 |
| Rv0811c/- | (cc=0.4134) | info on Rv0811c/- |
| Rv1191/- | (cc=0.4036) | info on Rv1191/- |
| Rv3561/fadD3 | (cc=0.4023) | info on Rv3561/fadD3 |
| Rv3521/- | (cc=0.3937) | info on Rv3521/- |
| Rv0117/oxyS | (cc=0.3881) | info on Rv0117/oxyS |
| Rv3761c/fadE36 | (cc=0.3846) | info on Rv3761c/fadE36 |
Correlation of Rv3636/- with Rv0446c/-
Normalized LFCs for Rv3636/-:
(description and provenance of datasets)
| Rv3636/- | Rv0446c/- | |
| Fe_supp_jason_reseq | 0.559 | 1.051 |
| low_pH_jason_reseq | -0.032 | 0.186 |
| NO_jason_reseq | 1.391 | -0.142 |
| B6_jason_reseq | 0.093 | -0.178 |
| MHCII_jason_reseq | 0.991 | 0.678 |
| Isoniazid02 | 0.288 | -0.198 |
| Rifampicin4 | 0.707 | -0.1 |
| Ethambutol3 | 0.136 | 0.202 |
| Meropenem3 | 1.744 | 0.075 |
| Vancomycin16 | 0.875 | 0.072 |
| Rv2680_day32 | -2.621 | -0.628 |
| H37Rv_KO_MarP | 0.831 | 0.392 |
| hypoxia_3wks | 0.315 | 0.339 |
| hypoxia_6wks | -0.453 | -0.169 |
| glycerol | 1.059 | -0.465 |
| cholesterol | -0.057 | -0.203 |
| AJ | 0.977 | -0.183 |
| Bibs02 | -0.766 | -0.673 |
| Bibs02c | -0.418 | 0.023 |
| BL6 | -0.488 | 0.684 |
| BL6a | -0.284 | -0.168 |
| BXD01 | 0.873 | -0.014 |
| BXD010 | 0.852 | -0.139 |
| BXD011 | 0.591 | -0.234 |
| BXD03 | -0.509 | -0.284 |
| BXD04 | -0.012 | 0.585 |
| BXD05 | 0.331 | 0.541 |
| BXD06 | 0.349 | -0.029 |
| BXD07 | 0.864 | 0.171 |
| BXD08 | 0.585 | 0.036 |
| BXD09 | 0.336 | 0.233 |
| CAST | -0.232 | -0.224 |
| CCcont | -0.231 | -0.227 |
| DS01 | 0.195 | -0.344 |
| DS02 | 0.274 | -1.185 |
| DS04 | 0.357 | -0.5 |
| DS0c | -0.385 | -0.385 |
| GP01 | -0.386 | -0.175 |
| GP02 | 0.451 | 0.672 |
| GP0c | 0.798 | -0.119 |
| NOD | -1.362 | -1.103 |
| NZO | 1.445 | 0.022 |
| PWK | 1.017 | 0.053 |
| H37Rv_KO_CtpC | 0.246 | -0.755 |
| H37Rv_KO_CtpD | 0.36 | 0.958 |
| H37Rv_KO_Rv1272 | 0.909 | -0.103 |
| H37Rv_KO_SugABC | 0.206 | 0.613 |
| H37Rv_KO_MbtN | 0.407 | 0.276 |
| Trans05 | 1.694 | 0.021 |
| macrophage_unactivated | -0.041 | 0.224 |
| IL1 | 0.62 | 0.021 |
| Rapamycin | 0.979 | 0.322 |
| Tcell | 0.492 | 0.094 |
| GMCSF | 0.301 | 0.349 |
| IFNab | -0.248 | 0.378 |
| IFNg | 0.853 | 1.09 |
| IFNg_GMCSF1 | 1.295 | 0.135 |
| Rv1432_day32 | -0.18 | -0.498 |
| Rv1565c_day32 | 0.329 | 0.374 |
| secA2_input | -0.675 | -0.518 |
| delta_Rv3594 | -1.104 | -1.002 |
| delta_Rv3717 | -0.106 | -0.638 |
| delta_Rv3811 | -0.462 | -0.836 |
| delta_Rv0954 | 0.49 | 0.631 |
| PonA1 | -0.021 | -0.384 |
| EccD1_KO | -0.335 | -0.191 |
| EspI_KO | 0.251 | 0.248 |
| PE35_KO | 0.172 | -0.073 |
| PPE68_KO | 0.096 | -0.582 |
| glycerol2 | 0.097 | -0.011 |
| lignocerate | -0.077 | 0.253 |
| oleate | 0.62 | -0.101 |
| phosphatidylcholine | 0.06 | -0.066 |
| acetate | -0.432 | -0.482 |
| glucAc | -0.582 | -0.339 |
| Rv0950ko | 0.938 | 0.434 |
| Rv1096ko | 2.129 | 0.694 |
| Rv3684ko | 1.634 | 0.442 |
| delta_otsA_trehalose | -1.138 | -0.645 |