Top 10 genes with highest correlation to Rv3590c/PE_PGRS58:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2490c/PE_PGRS43 | (cc=0.6343) | info on Rv2490c/PE_PGRS43 |
| Rv1818c/PE_PGRS33 | (cc=0.6148) | info on Rv1818c/PE_PGRS33 |
| Rv0747/PE_PGRS10 | (cc=0.6047) | info on Rv0747/PE_PGRS10 |
| Rv2340c/PE_PGRS39 | (cc=0.6006) | info on Rv2340c/PE_PGRS39 |
| Rv2236c/cobD | (cc=0.5915) | info on Rv2236c/cobD |
| Rv3612c/- | (cc=0.5689) | info on Rv3612c/- |
| Rv2559c/- | (cc=0.5624) | info on Rv2559c/- |
| Rv0836c/- | (cc=0.5579) | info on Rv0836c/- |
| Rv0614/- | (cc=0.5431) | info on Rv0614/- |
| Rv3897c/- | (cc=0.5378) | info on Rv3897c/- |
Correlation of Rv3590c/PE_PGRS58 with Rv3612c/-
Normalized LFCs for Rv3590c/PE_PGRS58:
(description and provenance of datasets)
| Rv3590c/PE_PGRS58 | Rv3612c/- | |
| Fe_supp_jason_reseq | -0.863 | -0.314 |
| low_pH_jason_reseq | 0.0 | -0.333 |
| NO_jason_reseq | 0.0 | 0.228 |
| B6_jason_reseq | 0.714 | 0.354 |
| MHCII_jason_reseq | 0.27 | 1.809 |
| Isoniazid02 | 0.79 | 1.394 |
| Rifampicin4 | 1.47 | 1.191 |
| Ethambutol3 | 0.728 | 0.069 |
| Meropenem3 | 0.096 | 0.232 |
| Vancomycin16 | 0.109 | 0.297 |
| Rv2680_day32 | 0.488 | 1.278 |
| H37Rv_KO_MarP | -0.143 | -0.065 |
| hypoxia_3wks | -0.287 | -2.512 |
| hypoxia_6wks | -1.102 | -1.643 |
| glycerol | 1.273 | 0.967 |
| cholesterol | 1.279 | -0.227 |
| AJ | 1.245 | 0.692 |
| Bibs02 | 0.833 | 0.628 |
| Bibs02c | 1.082 | 0.887 |
| BL6 | -0.827 | -1.024 |
| BL6a | -0.39 | -0.92 |
| BXD01 | -0.134 | -1.386 |
| BXD010 | -0.928 | -3.698 |
| BXD011 | -1.362 | -1.393 |
| BXD03 | -0.7 | -2.598 |
| BXD04 | -0.575 | -2.528 |
| BXD05 | -0.239 | -2.116 |
| BXD06 | -1.49 | -2.302 |
| BXD07 | -1.003 | -2.05 |
| BXD08 | -0.211 | -2.123 |
| BXD09 | -0.973 | -1.894 |
| CAST | -0.279 | -0.143 |
| CCcont | -0.416 | -1.971 |
| DS01 | 0.149 | 0.186 |
| DS02 | 0.945 | 0.156 |
| DS04 | -0.065 | 0.218 |
| DS0c | 0.589 | 0.192 |
| GP01 | 0.397 | -3.03 |
| GP02 | 0.226 | -3.04 |
| GP0c | 0.251 | -2.059 |
| NOD | 0.0 | -0.192 |
| NZO | 0.302 | 0.897 |
| PWK | 0.242 | 0.041 |
| H37Rv_KO_CtpC | -1.404 | -1.396 |
| H37Rv_KO_CtpD | -0.408 | -0.149 |
| H37Rv_KO_Rv1272 | 0.234 | -0.978 |
| H37Rv_KO_SugABC | -0.215 | -1.643 |
| H37Rv_KO_MbtN | -0.816 | -1.882 |
| Trans05 | -0.608 | -2.219 |
| macrophage_unactivated | 0.079 | 0.079 |
| IL1 | -0.552 | -0.602 |
| Rapamycin | -1.025 | -2.348 |
| Tcell | 0.0 | -0.789 |
| GMCSF | 0.716 | -0.087 |
| IFNab | -0.478 | -1.539 |
| IFNg | -1.245 | -1.62 |
| IFNg_GMCSF1 | -0.584 | -0.239 |
| Rv1432_day32 | 0.516 | -1.109 |
| Rv1565c_day32 | -0.276 | 1.218 |
| secA2_input | 0.038 | -0.88 |
| delta_Rv3594 | -0.451 | -0.953 |
| delta_Rv3717 | -0.736 | -0.578 |
| delta_Rv3811 | -0.253 | -2.119 |
| delta_Rv0954 | -0.469 | -1.16 |
| PonA1 | 0.175 | -0.472 |
| EccD1_KO | 0.599 | -2.171 |
| EspI_KO | -0.739 | -0.704 |
| PE35_KO | 0.531 | 0.359 |
| PPE68_KO | 0.134 | 0.323 |
| glycerol2 | -0.27 | 0.748 |
| lignocerate | 0.426 | -0.377 |
| oleate | 0.099 | -0.011 |
| phosphatidylcholine | 0.098 | 0.077 |
| acetate | 0.387 | -0.372 |
| glucAc | 0.877 | -0.977 |
| Rv0950ko | 1.043 | 0.084 |
| Rv1096ko | 0.899 | 0.446 |
| Rv3684ko | -0.413 | -1.038 |
| delta_otsA_trehalose | -0.122 | -0.057 |