Top 10 genes with highest correlation to Rv3590c/PE_PGRS58:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2490c/PE_PGRS43 | (cc=0.6343) | info on Rv2490c/PE_PGRS43 |
| Rv1818c/PE_PGRS33 | (cc=0.6148) | info on Rv1818c/PE_PGRS33 |
| Rv0747/PE_PGRS10 | (cc=0.6047) | info on Rv0747/PE_PGRS10 |
| Rv2340c/PE_PGRS39 | (cc=0.6006) | info on Rv2340c/PE_PGRS39 |
| Rv2236c/cobD | (cc=0.5915) | info on Rv2236c/cobD |
| Rv3612c/- | (cc=0.5689) | info on Rv3612c/- |
| Rv2559c/- | (cc=0.5624) | info on Rv2559c/- |
| Rv0836c/- | (cc=0.5579) | info on Rv0836c/- |
| Rv0614/- | (cc=0.5431) | info on Rv0614/- |
| Rv3897c/- | (cc=0.5378) | info on Rv3897c/- |
Correlation of Rv3590c/PE_PGRS58 with Rv0836c/-
Normalized LFCs for Rv3590c/PE_PGRS58:
(description and provenance of datasets)
| Rv3590c/PE_PGRS58 | Rv0836c/- | |
| Fe_supp_jason_reseq | -0.863 | -1.013 |
| low_pH_jason_reseq | 0.0 | -0.417 |
| NO_jason_reseq | 0.0 | -0.063 |
| B6_jason_reseq | 0.714 | -0.031 |
| MHCII_jason_reseq | 0.27 | 0.71 |
| Isoniazid02 | 0.79 | -0.342 |
| Rifampicin4 | 1.47 | -0.552 |
| Ethambutol3 | 0.728 | 0.206 |
| Meropenem3 | 0.096 | -0.454 |
| Vancomycin16 | 0.109 | -0.74 |
| Rv2680_day32 | 0.488 | -0.073 |
| H37Rv_KO_MarP | -0.143 | -0.051 |
| hypoxia_3wks | -0.287 | -0.271 |
| hypoxia_6wks | -1.102 | -0.583 |
| glycerol | 1.273 | 0.53 |
| cholesterol | 1.279 | 0.461 |
| AJ | 1.245 | 0.24 |
| Bibs02 | 0.833 | 0.642 |
| Bibs02c | 1.082 | 0.588 |
| BL6 | -0.827 | -1.303 |
| BL6a | -0.39 | -0.29 |
| BXD01 | -0.134 | -0.748 |
| BXD010 | -0.928 | -1.475 |
| BXD011 | -1.362 | -1.48 |
| BXD03 | -0.7 | -0.712 |
| BXD04 | -0.575 | -0.862 |
| BXD05 | -0.239 | -1.178 |
| BXD06 | -1.49 | -1.834 |
| BXD07 | -1.003 | -0.762 |
| BXD08 | -0.211 | -1.041 |
| BXD09 | -0.973 | -1.207 |
| CAST | -0.279 | -0.098 |
| CCcont | -0.416 | -1.344 |
| DS01 | 0.149 | 0.794 |
| DS02 | 0.945 | 0.714 |
| DS04 | -0.065 | -0.277 |
| DS0c | 0.589 | 1.205 |
| GP01 | 0.397 | 0.472 |
| GP02 | 0.226 | 0.926 |
| GP0c | 0.251 | -0.77 |
| NOD | 0.0 | 0.674 |
| NZO | 0.302 | 0.462 |
| PWK | 0.242 | 0.088 |
| H37Rv_KO_CtpC | -1.404 | -0.477 |
| H37Rv_KO_CtpD | -0.408 | -0.326 |
| H37Rv_KO_Rv1272 | 0.234 | -0.474 |
| H37Rv_KO_SugABC | -0.215 | 0.252 |
| H37Rv_KO_MbtN | -0.816 | 0.995 |
| Trans05 | -0.608 | -0.027 |
| macrophage_unactivated | 0.079 | -1.733 |
| IL1 | -0.552 | -0.801 |
| Rapamycin | -1.025 | -2.314 |
| Tcell | 0.0 | -1.359 |
| GMCSF | 0.716 | 2.086 |
| IFNab | -0.478 | -2.029 |
| IFNg | -1.245 | -1.221 |
| IFNg_GMCSF1 | -0.584 | -0.767 |
| Rv1432_day32 | 0.516 | -0.012 |
| Rv1565c_day32 | -0.276 | -0.509 |
| secA2_input | 0.038 | -0.859 |
| delta_Rv3594 | -0.451 | -1.13 |
| delta_Rv3717 | -0.736 | -0.491 |
| delta_Rv3811 | -0.253 | -1.52 |
| delta_Rv0954 | -0.469 | -0.55 |
| PonA1 | 0.175 | -0.368 |
| EccD1_KO | 0.599 | -0.964 |
| EspI_KO | -0.739 | -0.813 |
| PE35_KO | 0.531 | -0.598 |
| PPE68_KO | 0.134 | -0.937 |
| glycerol2 | -0.27 | -0.083 |
| lignocerate | 0.426 | -0.044 |
| oleate | 0.099 | 0.55 |
| phosphatidylcholine | 0.098 | -0.104 |
| acetate | 0.387 | -0.766 |
| glucAc | 0.877 | -0.55 |
| Rv0950ko | 1.043 | 0.706 |
| Rv1096ko | 0.899 | 2.307 |
| Rv3684ko | -0.413 | 0.878 |
| delta_otsA_trehalose | -0.122 | -0.606 |