Top 10 genes with highest correlation to Rv3578/arsB2:
update plot | correlation | link to info on gene |
---|---|---|
Rv1163/narJ | (cc=0.4573) | info on Rv1163/narJ |
Rv3440c/- | (cc=0.4366) | info on Rv3440c/- |
Rv2974c/- | (cc=0.4006) | info on Rv2974c/- |
Rv3788/- | (cc=0.3927) | info on Rv3788/- |
Rv3507/PE_PGRS53 | (cc=0.3839) | info on Rv3507/PE_PGRS53 |
Rv3122/- | (cc=0.379) | info on Rv3122/- |
Rv3450c/eccB4 | (cc=0.3768) | info on Rv3450c/eccB4 |
Rv1452c/PE_PGRS28 | (cc=0.3731) | info on Rv1452c/PE_PGRS28 |
Rv1660/pks10 | (cc=0.3716) | info on Rv1660/pks10 |
Rv0764c/cyp51 | (cc=0.36) | info on Rv0764c/cyp51 |
Correlation of Rv3578/arsB2 with Rv3788/-
Normalized LFCs for Rv3578/arsB2:
(description and provenance of datasets)
Rv3578/arsB2 | Rv3788/- | |
Fe_supp_jason_reseq | 0.107 | -0.401 |
low_pH_jason_reseq | -0.497 | -0.823 |
NO_jason_reseq | -0.533 | -0.685 |
B6_jason_reseq | -0.472 | -1.016 |
MHCII_jason_reseq | 0.182 | 0.244 |
Isoniazid02 | 0.32 | 0.227 |
Rifampicin4 | 0.788 | -0.439 |
Ethambutol3 | 0.247 | 0.056 |
Meropenem3 | 0.193 | -0.158 |
Vancomycin16 | 0.669 | -1.451 |
Rv2680_day32 | -0.206 | -0.326 |
H37Rv_KO_MarP | 0.061 | 0.111 |
hypoxia_3wks | 0.853 | -0.259 |
hypoxia_6wks | 0.687 | -0.263 |
glycerol | 1.056 | 0.81 |
cholesterol | 0.987 | 0.463 |
AJ | 0.466 | 0.898 |
Bibs02 | 1.282 | 0.069 |
Bibs02c | 0.547 | 0.17 |
BL6 | 0.187 | 0.246 |
BL6a | 0.228 | -0.839 |
BXD01 | 0.009 | -0.732 |
BXD010 | -0.081 | -0.592 |
BXD011 | -0.393 | -0.781 |
BXD03 | 0.041 | -0.992 |
BXD04 | 0.233 | -0.7 |
BXD05 | -0.118 | -0.088 |
BXD06 | -0.151 | -0.275 |
BXD07 | -0.305 | -0.627 |
BXD08 | 0.171 | -0.877 |
BXD09 | -0.159 | -0.579 |
CAST | 0.219 | 0.35 |
CCcont | 0.045 | -0.215 |
DS01 | 0.383 | -0.051 |
DS02 | -0.227 | 0.573 |
DS04 | 0.073 | -0.625 |
DS0c | 0.644 | -0.02 |
GP01 | 0.134 | -0.665 |
GP02 | 0.687 | -1.084 |
GP0c | 0.176 | -0.608 |
NOD | 0.877 | 1.378 |
NZO | 0.546 | 0.676 |
PWK | -0.172 | 0.318 |
H37Rv_KO_CtpC | 0.858 | 0.737 |
H37Rv_KO_CtpD | 1.208 | 0.672 |
H37Rv_KO_Rv1272 | 0.256 | -1.091 |
H37Rv_KO_SugABC | 0.457 | -2.448 |
H37Rv_KO_MbtN | -1.044 | -0.968 |
Trans05 | -0.652 | -0.334 |
macrophage_unactivated | 0.489 | -0.685 |
IL1 | 0.107 | -0.314 |
Rapamycin | 0.451 | -0.126 |
Tcell | -0.121 | -0.925 |
GMCSF | 0.048 | -0.415 |
IFNab | 0.109 | -0.381 |
IFNg | 0.142 | 0.0 |
IFNg_GMCSF1 | -0.295 | -0.952 |
Rv1432_day32 | 0.486 | 0.738 |
Rv1565c_day32 | 0.336 | -0.472 |
secA2_input | 0.454 | 1.594 |
delta_Rv3594 | 0.46 | -0.462 |
delta_Rv3717 | -0.04 | -0.344 |
delta_Rv3811 | 0.708 | -0.143 |
delta_Rv0954 | 0.322 | -0.836 |
PonA1 | 0.024 | 0.507 |
EccD1_KO | -0.168 | -0.888 |
EspI_KO | -0.145 | -1.124 |
PE35_KO | -0.274 | -0.613 |
PPE68_KO | -0.445 | -1.357 |
glycerol2 | 0.318 | -0.2 |
lignocerate | 0.265 | 0.186 |
oleate | 0.411 | 0.02 |
phosphatidylcholine | 0.615 | 0.253 |
acetate | 0.018 | -0.575 |
glucAc | -0.033 | -0.549 |
Rv0950ko | -0.226 | 0.516 |
Rv1096ko | -0.084 | -0.241 |
Rv3684ko | 0.029 | -0.452 |
delta_otsA_trehalose | 0.095 | 0.734 |