Top 10 genes with highest correlation to Rv3578/arsB2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1163/narJ | (cc=0.4573) | info on Rv1163/narJ |
| Rv3440c/- | (cc=0.4366) | info on Rv3440c/- |
| Rv2974c/- | (cc=0.4006) | info on Rv2974c/- |
| Rv3788/- | (cc=0.3927) | info on Rv3788/- |
| Rv3507/PE_PGRS53 | (cc=0.3839) | info on Rv3507/PE_PGRS53 |
| Rv3122/- | (cc=0.379) | info on Rv3122/- |
| Rv3450c/eccB4 | (cc=0.3768) | info on Rv3450c/eccB4 |
| Rv1452c/PE_PGRS28 | (cc=0.3731) | info on Rv1452c/PE_PGRS28 |
| Rv1660/pks10 | (cc=0.3716) | info on Rv1660/pks10 |
| Rv0764c/cyp51 | (cc=0.36) | info on Rv0764c/cyp51 |
Correlation of Rv3578/arsB2 with Rv1660/pks10
Normalized LFCs for Rv3578/arsB2:
(description and provenance of datasets)
| Rv3578/arsB2 | Rv1660/pks10 | |
| Fe_supp_jason_reseq | 0.107 | -0.755 |
| low_pH_jason_reseq | -0.497 | -0.527 |
| NO_jason_reseq | -0.533 | -1.037 |
| B6_jason_reseq | -0.472 | -0.412 |
| MHCII_jason_reseq | 0.182 | -0.266 |
| Isoniazid02 | 0.32 | 0.151 |
| Rifampicin4 | 0.788 | 0.154 |
| Ethambutol3 | 0.247 | -0.226 |
| Meropenem3 | 0.193 | -0.211 |
| Vancomycin16 | 0.669 | 0.172 |
| Rv2680_day32 | -0.206 | -0.209 |
| H37Rv_KO_MarP | 0.061 | 0.127 |
| hypoxia_3wks | 0.853 | -0.351 |
| hypoxia_6wks | 0.687 | -0.528 |
| glycerol | 1.056 | 0.756 |
| cholesterol | 0.987 | 0.037 |
| AJ | 0.466 | 0.682 |
| Bibs02 | 1.282 | 0.584 |
| Bibs02c | 0.547 | -0.185 |
| BL6 | 0.187 | 0.468 |
| BL6a | 0.228 | -0.086 |
| BXD01 | 0.009 | 0.457 |
| BXD010 | -0.081 | -0.332 |
| BXD011 | -0.393 | -0.022 |
| BXD03 | 0.041 | -0.968 |
| BXD04 | 0.233 | 0.273 |
| BXD05 | -0.118 | -0.132 |
| BXD06 | -0.151 | -0.023 |
| BXD07 | -0.305 | -0.085 |
| BXD08 | 0.171 | -0.581 |
| BXD09 | -0.159 | -0.319 |
| CAST | 0.219 | -0.06 |
| CCcont | 0.045 | -0.323 |
| DS01 | 0.383 | -0.231 |
| DS02 | -0.227 | -1.557 |
| DS04 | 0.073 | 0.204 |
| DS0c | 0.644 | 0.072 |
| GP01 | 0.134 | 1.116 |
| GP02 | 0.687 | 1.006 |
| GP0c | 0.176 | 0.759 |
| NOD | 0.877 | -0.76 |
| NZO | 0.546 | -0.329 |
| PWK | -0.172 | 0.858 |
| H37Rv_KO_CtpC | 0.858 | 0.964 |
| H37Rv_KO_CtpD | 1.208 | 0.083 |
| H37Rv_KO_Rv1272 | 0.256 | -0.428 |
| H37Rv_KO_SugABC | 0.457 | 1.472 |
| H37Rv_KO_MbtN | -1.044 | -1.036 |
| Trans05 | -0.652 | -0.622 |
| macrophage_unactivated | 0.489 | -0.155 |
| IL1 | 0.107 | -0.537 |
| Rapamycin | 0.451 | -0.23 |
| Tcell | -0.121 | -0.326 |
| GMCSF | 0.048 | -0.512 |
| IFNab | 0.109 | -0.187 |
| IFNg | 0.142 | 0.064 |
| IFNg_GMCSF1 | -0.295 | 0.437 |
| Rv1432_day32 | 0.486 | -0.282 |
| Rv1565c_day32 | 0.336 | -0.474 |
| secA2_input | 0.454 | 0.956 |
| delta_Rv3594 | 0.46 | 0.066 |
| delta_Rv3717 | -0.04 | -0.415 |
| delta_Rv3811 | 0.708 | 0.385 |
| delta_Rv0954 | 0.322 | -0.306 |
| PonA1 | 0.024 | -0.065 |
| EccD1_KO | -0.168 | 0.355 |
| EspI_KO | -0.145 | 0.0 |
| PE35_KO | -0.274 | 0.254 |
| PPE68_KO | -0.445 | -0.221 |
| glycerol2 | 0.318 | -0.084 |
| lignocerate | 0.265 | -0.035 |
| oleate | 0.411 | 0.359 |
| phosphatidylcholine | 0.615 | 0.389 |
| acetate | 0.018 | 0.401 |
| glucAc | -0.033 | 0.274 |
| Rv0950ko | -0.226 | -0.163 |
| Rv1096ko | -0.084 | -0.477 |
| Rv3684ko | 0.029 | -0.252 |
| delta_otsA_trehalose | 0.095 | 0.144 |