Top 10 genes with highest correlation to Rv3575c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2851c/- | (cc=0.5889) | info on Rv2851c/- |
| Rv2852c/mqo | (cc=0.4928) | info on Rv2852c/mqo |
| Rv0826/- | (cc=0.4461) | info on Rv0826/- |
| Rv3135/PPE50 | (cc=0.4348) | info on Rv3135/PPE50 |
| Rv3570c/hsaA | (cc=0.432) | info on Rv3570c/hsaA |
| Rv3272/- | (cc=0.4199) | info on Rv3272/- |
| Rv0624/vapC30 | (cc=0.4181) | info on Rv0624/vapC30 |
| Rv3549c/- | (cc=0.4108) | info on Rv3549c/- |
| Rv3687c/rsfB | (cc=0.4065) | info on Rv3687c/rsfB |
| Rv0491/regX3 | (cc=0.4045) | info on Rv0491/regX3 |
Correlation of Rv3575c/- with Rv3549c/-
Normalized LFCs for Rv3575c/-:
(description and provenance of datasets)
| Rv3575c/- | Rv3549c/- | |
| Fe_supp_jason_reseq | 0.079 | -1.26 |
| low_pH_jason_reseq | -1.128 | 2.25 |
| NO_jason_reseq | 0.331 | 0.866 |
| B6_jason_reseq | 0.737 | -0.837 |
| MHCII_jason_reseq | -0.495 | -3.049 |
| Isoniazid02 | -0.256 | -0.447 |
| Rifampicin4 | -1.053 | -1.703 |
| Ethambutol3 | 0.223 | 1.058 |
| Meropenem3 | 0.199 | -0.649 |
| Vancomycin16 | -1.207 | -0.281 |
| Rv2680_day32 | 1.286 | -0.852 |
| H37Rv_KO_MarP | 0.638 | -0.484 |
| hypoxia_3wks | 1.695 | -0.754 |
| hypoxia_6wks | 0.902 | -0.779 |
| glycerol | -0.657 | 1.008 |
| cholesterol | -2.09 | -3.148 |
| AJ | -0.363 | -2.005 |
| Bibs02 | -0.554 | -3.331 |
| Bibs02c | -0.209 | -3.66 |
| BL6 | -0.204 | -1.24 |
| BL6a | -1.155 | -2.174 |
| BXD01 | 0.688 | -0.813 |
| BXD010 | -0.331 | -0.385 |
| BXD011 | 0.305 | -0.858 |
| BXD03 | -0.247 | -0.209 |
| BXD04 | 0.806 | 0.411 |
| BXD05 | 0.008 | -2.452 |
| BXD06 | -0.326 | -1.323 |
| BXD07 | 0.068 | -1.197 |
| BXD08 | 1.018 | -0.572 |
| BXD09 | 0.484 | -0.662 |
| CAST | -2.167 | -2.132 |
| CCcont | -1.041 | -0.765 |
| DS01 | -0.447 | -3.302 |
| DS02 | 1.345 | -0.058 |
| DS04 | -0.278 | -1.036 |
| DS0c | -0.5 | -0.614 |
| GP01 | -0.123 | -1.539 |
| GP02 | -0.227 | -1.65 |
| GP0c | -0.059 | 0.432 |
| NOD | -1.516 | -1.103 |
| NZO | 1.706 | -0.67 |
| PWK | -1.388 | -1.526 |
| H37Rv_KO_CtpC | -0.528 | -2.842 |
| H37Rv_KO_CtpD | -0.679 | -2.216 |
| H37Rv_KO_Rv1272 | -0.406 | 0.877 |
| H37Rv_KO_SugABC | 0.1 | 1.692 |
| H37Rv_KO_MbtN | -0.434 | -1.253 |
| Trans05 | 0.979 | -0.242 |
| macrophage_unactivated | -0.593 | -1.146 |
| IL1 | 1.652 | -0.243 |
| Rapamycin | 0.758 | -0.522 |
| Tcell | 0.964 | -0.411 |
| GMCSF | 0.269 | -0.449 |
| IFNab | -0.568 | 0.236 |
| IFNg | 3.017 | 0.208 |
| IFNg_GMCSF1 | 2.533 | 0.698 |
| Rv1432_day32 | 2.677 | -0.18 |
| Rv1565c_day32 | -1.579 | -3.172 |
| secA2_input | 0.171 | -0.476 |
| delta_Rv3594 | 0.526 | 0.584 |
| delta_Rv3717 | 1.122 | 0.457 |
| delta_Rv3811 | 0.772 | 0.626 |
| delta_Rv0954 | 0.328 | -0.174 |
| PonA1 | -1.287 | -0.223 |
| EccD1_KO | -0.036 | 0.98 |
| EspI_KO | 0.063 | 1.115 |
| PE35_KO | 0.064 | 0.394 |
| PPE68_KO | 0.07 | 0.637 |
| glycerol2 | 1.152 | -0.08 |
| lignocerate | 0.04 | 0.161 |
| oleate | 0.047 | -1.126 |
| phosphatidylcholine | 0.657 | -0.48 |
| acetate | -0.672 | -0.095 |
| glucAc | -0.536 | 0.485 |
| Rv0950ko | 0.691 | 0.85 |
| Rv1096ko | 1.445 | 1.737 |
| Rv3684ko | 1.67 | 0.924 |
| delta_otsA_trehalose | 1.192 | 0.823 |