Top 10 genes with highest correlation to Rv3575c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2851c/- | (cc=0.5889) | info on Rv2851c/- |
| Rv2852c/mqo | (cc=0.4928) | info on Rv2852c/mqo |
| Rv0826/- | (cc=0.4461) | info on Rv0826/- |
| Rv3135/PPE50 | (cc=0.4348) | info on Rv3135/PPE50 |
| Rv3570c/hsaA | (cc=0.432) | info on Rv3570c/hsaA |
| Rv3272/- | (cc=0.4199) | info on Rv3272/- |
| Rv0624/vapC30 | (cc=0.4181) | info on Rv0624/vapC30 |
| Rv3549c/- | (cc=0.4108) | info on Rv3549c/- |
| Rv3687c/rsfB | (cc=0.4065) | info on Rv3687c/rsfB |
| Rv0491/regX3 | (cc=0.4045) | info on Rv0491/regX3 |
Correlation of Rv3575c/- with Rv0624/vapC30
Normalized LFCs for Rv3575c/-:
(description and provenance of datasets)
| Rv3575c/- | Rv0624/vapC30 | |
| Fe_supp_jason_reseq | 0.079 | -0.863 |
| low_pH_jason_reseq | -1.128 | 1.099 |
| NO_jason_reseq | 0.331 | 0.593 |
| B6_jason_reseq | 0.737 | 0.438 |
| MHCII_jason_reseq | -0.495 | 0.163 |
| Isoniazid02 | -0.256 | -0.13 |
| Rifampicin4 | -1.053 | -1.143 |
| Ethambutol3 | 0.223 | -0.146 |
| Meropenem3 | 0.199 | -0.405 |
| Vancomycin16 | -1.207 | -0.215 |
| Rv2680_day32 | 1.286 | 0.603 |
| H37Rv_KO_MarP | 0.638 | -0.065 |
| hypoxia_3wks | 1.695 | 0.343 |
| hypoxia_6wks | 0.902 | 0.363 |
| glycerol | -0.657 | -0.353 |
| cholesterol | -2.09 | -0.605 |
| AJ | -0.363 | -0.872 |
| Bibs02 | -0.554 | -0.13 |
| Bibs02c | -0.209 | -0.124 |
| BL6 | -0.204 | 0.007 |
| BL6a | -1.155 | 0.573 |
| BXD01 | 0.688 | 1.535 |
| BXD010 | -0.331 | -0.842 |
| BXD011 | 0.305 | 1.966 |
| BXD03 | -0.247 | 0.202 |
| BXD04 | 0.806 | 1.357 |
| BXD05 | 0.008 | 1.316 |
| BXD06 | -0.326 | 1.123 |
| BXD07 | 0.068 | 0.194 |
| BXD08 | 1.018 | 0.762 |
| BXD09 | 0.484 | 0.694 |
| CAST | -2.167 | -1.023 |
| CCcont | -1.041 | -0.106 |
| DS01 | -0.447 | 0.813 |
| DS02 | 1.345 | 0.074 |
| DS04 | -0.278 | 0.836 |
| DS0c | -0.5 | 0.693 |
| GP01 | -0.123 | -0.75 |
| GP02 | -0.227 | 1.584 |
| GP0c | -0.059 | 0.556 |
| NOD | -1.516 | -1.653 |
| NZO | 1.706 | 0.056 |
| PWK | -1.388 | -0.597 |
| H37Rv_KO_CtpC | -0.528 | -0.019 |
| H37Rv_KO_CtpD | -0.679 | 1.715 |
| H37Rv_KO_Rv1272 | -0.406 | 0.0 |
| H37Rv_KO_SugABC | 0.1 | -2.097 |
| H37Rv_KO_MbtN | -0.434 | -1.213 |
| Trans05 | 0.979 | 0.295 |
| macrophage_unactivated | -0.593 | 0.89 |
| IL1 | 1.652 | 1.189 |
| Rapamycin | 0.758 | 1.648 |
| Tcell | 0.964 | 1.75 |
| GMCSF | 0.269 | 0.446 |
| IFNab | -0.568 | 0.112 |
| IFNg | 3.017 | 0.051 |
| IFNg_GMCSF1 | 2.533 | 0.204 |
| Rv1432_day32 | 2.677 | 1.265 |
| Rv1565c_day32 | -1.579 | -0.469 |
| secA2_input | 0.171 | 2.101 |
| delta_Rv3594 | 0.526 | 0.823 |
| delta_Rv3717 | 1.122 | 1.056 |
| delta_Rv3811 | 0.772 | 1.041 |
| delta_Rv0954 | 0.328 | 0.171 |
| PonA1 | -1.287 | -1.323 |
| EccD1_KO | -0.036 | -0.184 |
| EspI_KO | 0.063 | -0.719 |
| PE35_KO | 0.064 | -0.032 |
| PPE68_KO | 0.07 | -0.179 |
| glycerol2 | 1.152 | 0.81 |
| lignocerate | 0.04 | 1.199 |
| oleate | 0.047 | 0.139 |
| phosphatidylcholine | 0.657 | 0.922 |
| acetate | -0.672 | 0.301 |
| glucAc | -0.536 | 0.562 |
| Rv0950ko | 0.691 | 0.88 |
| Rv1096ko | 1.445 | 0.712 |
| Rv3684ko | 1.67 | 2.613 |
| delta_otsA_trehalose | 1.192 | 0.227 |