Top 10 genes with highest correlation to Rv3520c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2007c/fdxA | (cc=0.6244) | info on Rv2007c/fdxA |
| Rv0089/- | (cc=0.5559) | info on Rv0089/- |
| Rv2681/- | (cc=0.5543) | info on Rv2681/- |
| Rv3058c/- | (cc=0.5502) | info on Rv3058c/- |
| Rv0963c/- | (cc=0.5445) | info on Rv0963c/- |
| Rv3468c/- | (cc=0.5379) | info on Rv3468c/- |
| Rv1880c/cyp140 | (cc=0.5333) | info on Rv1880c/cyp140 |
| Rv2237A/- | (cc=0.5328) | info on Rv2237A/- |
| Rv3819/- | (cc=0.5244) | info on Rv3819/- |
| Rv1033c/trcR | (cc=0.5121) | info on Rv1033c/trcR |
Correlation of Rv3520c/- with Rv1033c/trcR
Normalized LFCs for Rv3520c/-:
(description and provenance of datasets)
| Rv3520c/- | Rv1033c/trcR | |
| Fe_supp_jason_reseq | 0.009 | 0.638 |
| low_pH_jason_reseq | -0.442 | -0.097 |
| NO_jason_reseq | -0.171 | 0.827 |
| B6_jason_reseq | -0.38 | 0.15 |
| MHCII_jason_reseq | 0.061 | 0.557 |
| Isoniazid02 | -0.047 | -0.096 |
| Rifampicin4 | -0.325 | -0.219 |
| Ethambutol3 | -0.304 | -0.092 |
| Meropenem3 | -0.229 | -0.151 |
| Vancomycin16 | 0.133 | 0.0 |
| Rv2680_day32 | 0.072 | -0.043 |
| H37Rv_KO_MarP | 0.816 | 0.391 |
| hypoxia_3wks | -0.104 | -0.108 |
| hypoxia_6wks | -0.706 | -0.931 |
| glycerol | 0.035 | 0.199 |
| cholesterol | -0.041 | 0.877 |
| AJ | -0.124 | 1.103 |
| Bibs02 | -0.032 | 0.246 |
| Bibs02c | 0.553 | 0.746 |
| BL6 | 0.064 | -0.694 |
| BL6a | 0.133 | 0.474 |
| BXD01 | -0.26 | -0.088 |
| BXD010 | -0.552 | -0.299 |
| BXD011 | -0.597 | -0.165 |
| BXD03 | -0.181 | 0.296 |
| BXD04 | -0.026 | 0.273 |
| BXD05 | -0.706 | 0.054 |
| BXD06 | -0.278 | -0.392 |
| BXD07 | -0.575 | -0.066 |
| BXD08 | -0.371 | 0.068 |
| BXD09 | -0.803 | 0.004 |
| CAST | -0.098 | -0.339 |
| CCcont | -0.053 | 0.168 |
| DS01 | -0.026 | 0.45 |
| DS02 | -0.241 | 0.25 |
| DS04 | -0.069 | -0.271 |
| DS0c | 0.038 | 0.231 |
| GP01 | -0.512 | -0.487 |
| GP02 | -1.016 | 0.251 |
| GP0c | -1.122 | -0.201 |
| NOD | 0.166 | 0.356 |
| NZO | 0.405 | 1.273 |
| PWK | -0.186 | -0.567 |
| H37Rv_KO_CtpC | -0.18 | -0.292 |
| H37Rv_KO_CtpD | -0.33 | -0.036 |
| H37Rv_KO_Rv1272 | 0.177 | -0.34 |
| H37Rv_KO_SugABC | 0.145 | 0.324 |
| H37Rv_KO_MbtN | -0.259 | -0.824 |
| Trans05 | -0.115 | -0.804 |
| macrophage_unactivated | -0.366 | 0.114 |
| IL1 | -0.718 | -0.362 |
| Rapamycin | -0.546 | -0.028 |
| Tcell | 0.222 | -0.196 |
| GMCSF | 0.198 | -0.533 |
| IFNab | -0.284 | -0.565 |
| IFNg | -0.497 | -0.783 |
| IFNg_GMCSF1 | -0.11 | 0.085 |
| Rv1432_day32 | -0.378 | 0.0 |
| Rv1565c_day32 | 0.755 | 0.332 |
| secA2_input | -0.776 | -0.535 |
| delta_Rv3594 | -0.084 | 0.236 |
| delta_Rv3717 | -0.932 | -0.549 |
| delta_Rv3811 | -0.656 | -0.361 |
| delta_Rv0954 | -0.063 | 0.336 |
| PonA1 | 0.257 | 0.04 |
| EccD1_KO | 0.372 | 0.059 |
| EspI_KO | 0.379 | 0.662 |
| PE35_KO | 0.061 | 0.309 |
| PPE68_KO | -0.016 | 0.538 |
| glycerol2 | 0.324 | 0.996 |
| lignocerate | 0.952 | 0.654 |
| oleate | 0.255 | 0.936 |
| phosphatidylcholine | 0.676 | 0.766 |
| acetate | 0.475 | -0.238 |
| glucAc | 0.499 | 0.267 |
| Rv0950ko | 0.905 | 0.814 |
| Rv1096ko | 0.368 | 0.374 |
| Rv3684ko | 0.596 | 0.262 |
| delta_otsA_trehalose | 1.04 | 0.278 |