Top 10 genes with highest correlation to Rv3520c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2007c/fdxA | (cc=0.6244) | info on Rv2007c/fdxA |
| Rv0089/- | (cc=0.5559) | info on Rv0089/- |
| Rv2681/- | (cc=0.5543) | info on Rv2681/- |
| Rv3058c/- | (cc=0.5502) | info on Rv3058c/- |
| Rv0963c/- | (cc=0.5445) | info on Rv0963c/- |
| Rv3468c/- | (cc=0.5379) | info on Rv3468c/- |
| Rv1880c/cyp140 | (cc=0.5333) | info on Rv1880c/cyp140 |
| Rv2237A/- | (cc=0.5328) | info on Rv2237A/- |
| Rv3819/- | (cc=0.5244) | info on Rv3819/- |
| Rv1033c/trcR | (cc=0.5121) | info on Rv1033c/trcR |
Correlation of Rv3520c/- with Rv0963c/-
Normalized LFCs for Rv3520c/-:
(description and provenance of datasets)
| Rv3520c/- | Rv0963c/- | |
| Fe_supp_jason_reseq | 0.009 | -0.998 |
| low_pH_jason_reseq | -0.442 | -1.031 |
| NO_jason_reseq | -0.171 | -0.081 |
| B6_jason_reseq | -0.38 | 0.652 |
| MHCII_jason_reseq | 0.061 | -0.415 |
| Isoniazid02 | -0.047 | 0.113 |
| Rifampicin4 | -0.325 | -0.479 |
| Ethambutol3 | -0.304 | -0.308 |
| Meropenem3 | -0.229 | -0.108 |
| Vancomycin16 | 0.133 | 0.47 |
| Rv2680_day32 | 0.072 | -0.045 |
| H37Rv_KO_MarP | 0.816 | 0.532 |
| hypoxia_3wks | -0.104 | -1.587 |
| hypoxia_6wks | -0.706 | -0.831 |
| glycerol | 0.035 | -0.594 |
| cholesterol | -0.041 | -0.226 |
| AJ | -0.124 | 0.419 |
| Bibs02 | -0.032 | 0.585 |
| Bibs02c | 0.553 | 0.068 |
| BL6 | 0.064 | 0.424 |
| BL6a | 0.133 | 0.102 |
| BXD01 | -0.26 | -0.869 |
| BXD010 | -0.552 | 0.042 |
| BXD011 | -0.597 | 0.042 |
| BXD03 | -0.181 | -0.352 |
| BXD04 | -0.026 | -0.28 |
| BXD05 | -0.706 | -0.372 |
| BXD06 | -0.278 | 0.06 |
| BXD07 | -0.575 | -0.791 |
| BXD08 | -0.371 | 0.118 |
| BXD09 | -0.803 | -0.307 |
| CAST | -0.098 | 0.339 |
| CCcont | -0.053 | 0.132 |
| DS01 | -0.026 | 0.18 |
| DS02 | -0.241 | -0.458 |
| DS04 | -0.069 | -0.132 |
| DS0c | 0.038 | 0.896 |
| GP01 | -0.512 | -0.789 |
| GP02 | -1.016 | -0.237 |
| GP0c | -1.122 | -0.7 |
| NOD | 0.166 | 0.918 |
| NZO | 0.405 | 0.35 |
| PWK | -0.186 | 0.398 |
| H37Rv_KO_CtpC | -0.18 | 0.727 |
| H37Rv_KO_CtpD | -0.33 | 0.186 |
| H37Rv_KO_Rv1272 | 0.177 | 0.316 |
| H37Rv_KO_SugABC | 0.145 | 0.273 |
| H37Rv_KO_MbtN | -0.259 | 0.146 |
| Trans05 | -0.115 | 0.456 |
| macrophage_unactivated | -0.366 | -0.716 |
| IL1 | -0.718 | -0.077 |
| Rapamycin | -0.546 | -0.362 |
| Tcell | 0.222 | -0.978 |
| GMCSF | 0.198 | 0.937 |
| IFNab | -0.284 | -0.475 |
| IFNg | -0.497 | -0.446 |
| IFNg_GMCSF1 | -0.11 | -1.442 |
| Rv1432_day32 | -0.378 | -0.67 |
| Rv1565c_day32 | 0.755 | 0.215 |
| secA2_input | -0.776 | -0.379 |
| delta_Rv3594 | -0.084 | 0.694 |
| delta_Rv3717 | -0.932 | 0.35 |
| delta_Rv3811 | -0.656 | 0.162 |
| delta_Rv0954 | -0.063 | -0.152 |
| PonA1 | 0.257 | -0.108 |
| EccD1_KO | 0.372 | 0.345 |
| EspI_KO | 0.379 | 0.71 |
| PE35_KO | 0.061 | 0.636 |
| PPE68_KO | -0.016 | -0.029 |
| glycerol2 | 0.324 | 1.342 |
| lignocerate | 0.952 | 2.081 |
| oleate | 0.255 | -0.296 |
| phosphatidylcholine | 0.676 | 1.342 |
| acetate | 0.475 | 2.103 |
| glucAc | 0.499 | 2.008 |
| Rv0950ko | 0.905 | 0.832 |
| Rv1096ko | 0.368 | 1.062 |
| Rv3684ko | 0.596 | 0.665 |
| delta_otsA_trehalose | 1.04 | 0.423 |