Top 10 genes with highest correlation to Rv3520c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2007c/fdxA | (cc=0.6244) | info on Rv2007c/fdxA |
| Rv0089/- | (cc=0.5559) | info on Rv0089/- |
| Rv2681/- | (cc=0.5543) | info on Rv2681/- |
| Rv3058c/- | (cc=0.5502) | info on Rv3058c/- |
| Rv0963c/- | (cc=0.5445) | info on Rv0963c/- |
| Rv3468c/- | (cc=0.5379) | info on Rv3468c/- |
| Rv1880c/cyp140 | (cc=0.5333) | info on Rv1880c/cyp140 |
| Rv2237A/- | (cc=0.5328) | info on Rv2237A/- |
| Rv3819/- | (cc=0.5244) | info on Rv3819/- |
| Rv1033c/trcR | (cc=0.5121) | info on Rv1033c/trcR |
Correlation of Rv3520c/- with Rv2007c/fdxA
Normalized LFCs for Rv3520c/-:
(description and provenance of datasets)
| Rv3520c/- | Rv2007c/fdxA | |
| Fe_supp_jason_reseq | 0.009 | -0.204 |
| low_pH_jason_reseq | -0.442 | -1.392 |
| NO_jason_reseq | -0.171 | -0.11 |
| B6_jason_reseq | -0.38 | 1.433 |
| MHCII_jason_reseq | 0.061 | 0.95 |
| Isoniazid02 | -0.047 | 1.404 |
| Rifampicin4 | -0.325 | -0.504 |
| Ethambutol3 | -0.304 | 0.536 |
| Meropenem3 | -0.229 | 0.058 |
| Vancomycin16 | 0.133 | -0.151 |
| Rv2680_day32 | 0.072 | 0.81 |
| H37Rv_KO_MarP | 0.816 | 0.46 |
| hypoxia_3wks | -0.104 | -0.742 |
| hypoxia_6wks | -0.706 | -0.472 |
| glycerol | 0.035 | 0.009 |
| cholesterol | -0.041 | 0.168 |
| AJ | -0.124 | 0.39 |
| Bibs02 | -0.032 | -0.584 |
| Bibs02c | 0.553 | -0.608 |
| BL6 | 0.064 | -0.133 |
| BL6a | 0.133 | -1.979 |
| BXD01 | -0.26 | -0.994 |
| BXD010 | -0.552 | -2.471 |
| BXD011 | -0.597 | -0.939 |
| BXD03 | -0.181 | -1.307 |
| BXD04 | -0.026 | -1.409 |
| BXD05 | -0.706 | -0.376 |
| BXD06 | -0.278 | -0.973 |
| BXD07 | -0.575 | -1.338 |
| BXD08 | -0.371 | -1.695 |
| BXD09 | -0.803 | -1.372 |
| CAST | -0.098 | 0.507 |
| CCcont | -0.053 | -0.943 |
| DS01 | -0.026 | 0.464 |
| DS02 | -0.241 | 0.545 |
| DS04 | -0.069 | 0.275 |
| DS0c | 0.038 | 0.859 |
| GP01 | -0.512 | -2.45 |
| GP02 | -1.016 | -2.63 |
| GP0c | -1.122 | -1.015 |
| NOD | 0.166 | 0.433 |
| NZO | 0.405 | 0.585 |
| PWK | -0.186 | 0.618 |
| H37Rv_KO_CtpC | -0.18 | -0.737 |
| H37Rv_KO_CtpD | -0.33 | -0.202 |
| H37Rv_KO_Rv1272 | 0.177 | 1.003 |
| H37Rv_KO_SugABC | 0.145 | -1.786 |
| H37Rv_KO_MbtN | -0.259 | -0.852 |
| Trans05 | -0.115 | 0.514 |
| macrophage_unactivated | -0.366 | -1.042 |
| IL1 | -0.718 | -1.317 |
| Rapamycin | -0.546 | -0.46 |
| Tcell | 0.222 | -1.496 |
| GMCSF | 0.198 | 0.436 |
| IFNab | -0.284 | -0.795 |
| IFNg | -0.497 | 0.337 |
| IFNg_GMCSF1 | -0.11 | 1.603 |
| Rv1432_day32 | -0.378 | 0.0 |
| Rv1565c_day32 | 0.755 | -0.327 |
| secA2_input | -0.776 | -1.791 |
| delta_Rv3594 | -0.084 | -0.376 |
| delta_Rv3717 | -0.932 | -0.019 |
| delta_Rv3811 | -0.656 | -0.758 |
| delta_Rv0954 | -0.063 | -0.397 |
| PonA1 | 0.257 | -2.163 |
| EccD1_KO | 0.372 | 0.46 |
| EspI_KO | 0.379 | 0.522 |
| PE35_KO | 0.061 | 0.837 |
| PPE68_KO | -0.016 | 0.79 |
| glycerol2 | 0.324 | 2.254 |
| lignocerate | 0.952 | 3.177 |
| oleate | 0.255 | -0.105 |
| phosphatidylcholine | 0.676 | 2.724 |
| acetate | 0.475 | 3.607 |
| glucAc | 0.499 | 3.073 |
| Rv0950ko | 0.905 | 2.174 |
| Rv1096ko | 0.368 | 1.167 |
| Rv3684ko | 0.596 | 2.394 |
| delta_otsA_trehalose | 1.04 | 3.412 |