Top 10 genes with highest correlation to Rv3505/fadE27:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3152/nuoH | (cc=0.4212) | info on Rv3152/nuoH |
| Rv0755A/- | (cc=0.4163) | info on Rv0755A/- |
| Rv1362c/- | (cc=0.4051) | info on Rv1362c/- |
| Rv3382c/lytB1 | (cc=0.3987) | info on Rv3382c/lytB1 |
| Rv0052/- | (cc=0.3866) | info on Rv0052/- |
| Rv1021/- | (cc=0.3832) | info on Rv1021/- |
| Rv0799c/- | (cc=0.3697) | info on Rv0799c/- |
| Rv0459/- | (cc=0.3641) | info on Rv0459/- |
| Rv2548/vapC19 | (cc=0.364) | info on Rv2548/vapC19 |
| Rv3150/nuoF | (cc=0.3634) | info on Rv3150/nuoF |
Correlation of Rv3505/fadE27 with Rv0799c/-
Normalized LFCs for Rv3505/fadE27:
(description and provenance of datasets)
| Rv3505/fadE27 | Rv0799c/- | |
| Fe_supp_jason_reseq | -0.939 | -0.33 |
| low_pH_jason_reseq | -0.661 | -0.507 |
| NO_jason_reseq | 0.898 | 0.0 |
| B6_jason_reseq | -0.468 | -1.089 |
| MHCII_jason_reseq | 0.885 | 0.527 |
| Isoniazid02 | 0.383 | -0.224 |
| Rifampicin4 | -0.149 | 0.861 |
| Ethambutol3 | -0.235 | 0.303 |
| Meropenem3 | -0.386 | 0.0 |
| Vancomycin16 | 0.321 | 0.565 |
| Rv2680_day32 | -1.293 | -2.674 |
| H37Rv_KO_MarP | -0.188 | -0.203 |
| hypoxia_3wks | 0.538 | 0.387 |
| hypoxia_6wks | 0.192 | 0.052 |
| glycerol | -0.762 | -1.021 |
| cholesterol | -0.835 | -0.13 |
| AJ | 0.108 | -0.319 |
| Bibs02 | 1.094 | 0.4 |
| Bibs02c | 1.325 | -0.188 |
| BL6 | 0.3 | 1.128 |
| BL6a | 1.403 | 1.611 |
| BXD01 | -0.552 | 1.365 |
| BXD010 | 0.444 | 1.193 |
| BXD011 | 0.631 | 0.985 |
| BXD03 | -0.421 | 1.67 |
| BXD04 | 1.208 | 0.256 |
| BXD05 | 0.042 | 1.533 |
| BXD06 | 0.607 | 1.014 |
| BXD07 | 0.4 | 0.858 |
| BXD08 | 0.352 | 1.038 |
| BXD09 | 0.208 | 1.171 |
| CAST | -0.354 | -0.596 |
| CCcont | 0.432 | 1.254 |
| DS01 | 0.737 | 0.287 |
| DS02 | -1.027 | -0.263 |
| DS04 | 0.465 | 0.698 |
| DS0c | 0.068 | 0.574 |
| GP01 | -1.134 | 0.169 |
| GP02 | 0.379 | -0.347 |
| GP0c | -0.521 | -0.313 |
| NOD | -0.848 | 0.358 |
| NZO | 0.503 | -0.275 |
| PWK | -1.131 | 0.54 |
| H37Rv_KO_CtpC | 0.671 | 0.134 |
| H37Rv_KO_CtpD | 1.244 | 1.38 |
| H37Rv_KO_Rv1272 | -0.501 | -0.781 |
| H37Rv_KO_SugABC | 0.575 | -1.449 |
| H37Rv_KO_MbtN | 0.078 | 1.286 |
| Trans05 | 1.521 | 1.122 |
| macrophage_unactivated | -1.086 | 0.057 |
| IL1 | 0.258 | 0.371 |
| Rapamycin | 0.448 | 0.687 |
| Tcell | -0.815 | 0.352 |
| GMCSF | 1.325 | -0.201 |
| IFNab | -0.079 | 0.193 |
| IFNg | -0.668 | 0.147 |
| IFNg_GMCSF1 | -0.163 | 0.028 |
| Rv1432_day32 | -0.42 | -0.18 |
| Rv1565c_day32 | 0.556 | -0.559 |
| secA2_input | 0.723 | -0.416 |
| delta_Rv3594 | -0.607 | -0.941 |
| delta_Rv3717 | -1.029 | -0.369 |
| delta_Rv3811 | -0.674 | -0.574 |
| delta_Rv0954 | -0.995 | -0.159 |
| PonA1 | -0.355 | 0.099 |
| EccD1_KO | -0.51 | 0.049 |
| EspI_KO | -1.101 | 1.392 |
| PE35_KO | -0.131 | 0.254 |
| PPE68_KO | 0.362 | 0.186 |
| glycerol2 | -0.324 | -0.011 |
| lignocerate | -0.066 | -0.248 |
| oleate | 0.0 | -0.169 |
| phosphatidylcholine | -0.238 | 0.387 |
| acetate | 0.213 | -0.052 |
| glucAc | 0.49 | -0.648 |
| Rv0950ko | -0.829 | -1.239 |
| Rv1096ko | -0.274 | -1.071 |
| Rv3684ko | -1.019 | -1.791 |
| delta_otsA_trehalose | 0.422 | 1.152 |