Top 10 genes with highest correlation to Rv3413c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1846c/blaI | (cc=0.6366) | info on Rv1846c/blaI |
| Rv3005c/- | (cc=0.5405) | info on Rv3005c/- |
| Rv3717/- | (cc=0.5143) | info on Rv3717/- |
| Rv0994/moeA1 | (cc=0.5005) | info on Rv0994/moeA1 |
| Rv0406c/- | (cc=0.4952) | info on Rv0406c/- |
| Rv2564/glnQ | (cc=0.4907) | info on Rv2564/glnQ |
| Rv3661/- | (cc=0.4772) | info on Rv3661/- |
| Rv2125/- | (cc=0.4703) | info on Rv2125/- |
| Rv0561c/- | (cc=0.4689) | info on Rv0561c/- |
| Rv2563/- | (cc=0.4586) | info on Rv2563/- |
Correlation of Rv3413c/- with Rv1846c/blaI
Normalized LFCs for Rv3413c/-:
(description and provenance of datasets)
| Rv3413c/- | Rv1846c/blaI | |
| Fe_supp_jason_reseq | -0.227 | 1.228 |
| low_pH_jason_reseq | -1.228 | -2.418 |
| NO_jason_reseq | -0.223 | 0.189 |
| B6_jason_reseq | -1.577 | -1.843 |
| MHCII_jason_reseq | 0.184 | 0.355 |
| Isoniazid02 | 0.045 | 0.901 |
| Rifampicin4 | -1.627 | -1.267 |
| Ethambutol3 | -0.663 | -0.326 |
| Meropenem3 | -1.381 | 0.204 |
| Vancomycin16 | -0.241 | -0.796 |
| Rv2680_day32 | -2.448 | -3.093 |
| H37Rv_KO_MarP | -1.997 | 0.268 |
| hypoxia_3wks | -1.101 | 0.271 |
| hypoxia_6wks | -0.689 | -1.37 |
| glycerol | -1.463 | -1.583 |
| cholesterol | 0.636 | -1.124 |
| AJ | -0.842 | -2.04 |
| Bibs02 | 0.376 | -0.354 |
| Bibs02c | 0.45 | 1.129 |
| BL6 | -2.133 | -3.872 |
| BL6a | 0.033 | -0.525 |
| BXD01 | -2.613 | -2.917 |
| BXD010 | -2.52 | -4.379 |
| BXD011 | -1.682 | -3.02 |
| BXD03 | -0.876 | -2.664 |
| BXD04 | -1.737 | -2.849 |
| BXD05 | -0.901 | -1.847 |
| BXD06 | -2.441 | -3.663 |
| BXD07 | -1.622 | -3.87 |
| BXD08 | -0.919 | -2.336 |
| BXD09 | -1.574 | -3.237 |
| CAST | -2.579 | -2.636 |
| CCcont | -1.116 | -2.433 |
| DS01 | 1.271 | 0.14 |
| DS02 | 1.308 | 1.275 |
| DS04 | -0.483 | -0.086 |
| DS0c | 0.685 | -0.545 |
| GP01 | -0.639 | -0.877 |
| GP02 | -1.205 | -1.601 |
| GP0c | -0.462 | -1.516 |
| NOD | 0.623 | -1.726 |
| NZO | -1.272 | -1.787 |
| PWK | -1.398 | -1.758 |
| H37Rv_KO_CtpC | 1.116 | -2.732 |
| H37Rv_KO_CtpD | -0.742 | -2.466 |
| H37Rv_KO_Rv1272 | -1.022 | -1.974 |
| H37Rv_KO_SugABC | -0.023 | -1.211 |
| H37Rv_KO_MbtN | -1.244 | -0.641 |
| Trans05 | -2.672 | -2.346 |
| macrophage_unactivated | -0.666 | -0.073 |
| IL1 | 0.056 | -0.67 |
| Rapamycin | 0.921 | -0.611 |
| Tcell | -1.492 | -1.613 |
| GMCSF | 1.212 | 0.972 |
| IFNab | 0.529 | 0.653 |
| IFNg | -0.593 | -1.235 |
| IFNg_GMCSF1 | -0.031 | 2.256 |
| Rv1432_day32 | -1.207 | -0.632 |
| Rv1565c_day32 | -0.37 | 0.706 |
| secA2_input | -0.249 | -0.593 |
| delta_Rv3594 | 0.329 | 0.22 |
| delta_Rv3717 | -0.038 | 0.052 |
| delta_Rv3811 | 0.348 | 0.904 |
| delta_Rv0954 | 0.39 | 0.249 |
| PonA1 | 0.314 | 0.869 |
| EccD1_KO | -1.069 | 0.908 |
| EspI_KO | -0.248 | 0.279 |
| PE35_KO | -0.627 | -0.152 |
| PPE68_KO | -0.448 | 0.07 |
| glycerol2 | -0.601 | 1.499 |
| lignocerate | -0.392 | 0.168 |
| oleate | -1.249 | 0.196 |
| phosphatidylcholine | -0.524 | 0.0 |
| acetate | 1.252 | 0.0 |
| glucAc | 0.236 | 0.0 |
| Rv0950ko | 0.748 | 2.249 |
| Rv1096ko | 1.577 | -0.175 |
| Rv3684ko | 0.278 | 1.621 |
| delta_otsA_trehalose | -0.816 | -0.429 |