Top 10 genes with highest correlation to Rv3394c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3511/PE_PGRS55 | (cc=0.5008) | info on Rv3511/PE_PGRS55 |
Rv3514/PE_PGRS57 | (cc=0.4562) | info on Rv3514/PE_PGRS57 |
Rv3508/PE_PGRS54 | (cc=0.4517) | info on Rv3508/PE_PGRS54 |
Rv2853/PE_PGRS48 | (cc=0.4274) | info on Rv2853/PE_PGRS48 |
Rv2431c/PE25 | (cc=0.405) | info on Rv2431c/PE25 |
Rv0834c/PE_PGRS14 | (cc=0.4013) | info on Rv0834c/PE_PGRS14 |
Rv0142/- | (cc=0.3995) | info on Rv0142/- |
Rv3299c/atsB | (cc=0.399) | info on Rv3299c/atsB |
Rv0858c/dapC | (cc=0.3974) | info on Rv0858c/dapC |
Rv3470c/ilvB2 | (cc=0.3907) | info on Rv3470c/ilvB2 |
Correlation of Rv3394c/- with Rv0834c/PE_PGRS14
Normalized LFCs for Rv3394c/-:
(description and provenance of datasets)
Rv3394c/- | Rv0834c/PE_PGRS14 | |
Fe_supp_jason_reseq | -0.829 | -1.114 |
low_pH_jason_reseq | 1.228 | -0.642 |
NO_jason_reseq | 0.591 | -0.667 |
B6_jason_reseq | -1.269 | -0.762 |
MHCII_jason_reseq | -0.58 | -0.046 |
Isoniazid02 | -0.339 | -0.971 |
Rifampicin4 | 0.72 | 0.723 |
Ethambutol3 | -0.197 | -0.4 |
Meropenem3 | 0.207 | 0.016 |
Vancomycin16 | 0.0 | -0.143 |
Rv2680_day32 | -0.422 | -0.488 |
H37Rv_KO_MarP | 0.289 | 0.138 |
hypoxia_3wks | 0.439 | -0.315 |
hypoxia_6wks | -0.048 | -0.403 |
glycerol | 2.058 | 1.138 |
cholesterol | 1.696 | 0.609 |
AJ | 1.627 | 0.37 |
Bibs02 | 0.0 | 0.837 |
Bibs02c | 0.756 | 1.15 |
BL6 | 0.16 | 0.083 |
BL6a | 0.443 | 0.502 |
BXD01 | 0.029 | 0.044 |
BXD010 | 0.4 | 0.015 |
BXD011 | 0.137 | -0.511 |
BXD03 | 0.399 | 0.09 |
BXD04 | 0.486 | 0.056 |
BXD05 | 0.373 | 0.28 |
BXD06 | 0.417 | -0.233 |
BXD07 | 0.232 | 0.207 |
BXD08 | 1.2 | 0.337 |
BXD09 | 0.39 | 0.182 |
CAST | 0.385 | 0.153 |
CCcont | 0.677 | -0.124 |
DS01 | 0.777 | -0.648 |
DS02 | 0.364 | -0.564 |
DS04 | 1.147 | 0.066 |
DS0c | -0.823 | -0.728 |
GP01 | 1.305 | 0.147 |
GP02 | 1.89 | 0.48 |
GP0c | 0.769 | 0.258 |
NOD | -0.158 | -0.583 |
NZO | 0.446 | 0.155 |
PWK | 0.0 | 0.131 |
H37Rv_KO_CtpC | 0.587 | 0.291 |
H37Rv_KO_CtpD | 0.351 | 0.58 |
H37Rv_KO_Rv1272 | 1.115 | 0.016 |
H37Rv_KO_SugABC | 0.659 | 0.578 |
H37Rv_KO_MbtN | -0.024 | 0.271 |
Trans05 | 1.567 | -0.015 |
macrophage_unactivated | -0.114 | 0.0 |
IL1 | 0.727 | -0.492 |
Rapamycin | -0.055 | 0.0 |
Tcell | -0.554 | -0.489 |
GMCSF | 0.317 | 0.037 |
IFNab | -0.109 | -0.408 |
IFNg | 0.406 | -0.532 |
IFNg_GMCSF1 | 1.09 | -0.091 |
Rv1432_day32 | 1.112 | 0.944 |
Rv1565c_day32 | 1.887 | -0.99 |
secA2_input | 0.269 | 0.225 |
delta_Rv3594 | -0.078 | 0.037 |
delta_Rv3717 | 0.062 | -0.286 |
delta_Rv3811 | 0.073 | 0.21 |
delta_Rv0954 | 0.124 | -0.081 |
PonA1 | 0.329 | 0.097 |
EccD1_KO | 0.753 | -0.122 |
EspI_KO | -0.322 | 0.137 |
PE35_KO | -0.137 | -0.184 |
PPE68_KO | 0.099 | -0.202 |
glycerol2 | -0.059 | 0.315 |
lignocerate | 0.499 | 0.293 |
oleate | 0.274 | 0.225 |
phosphatidylcholine | 0.296 | 0.246 |
acetate | 0.733 | 0.321 |
glucAc | 0.307 | 0.329 |
Rv0950ko | 0.1 | 0.6 |
Rv1096ko | 0.473 | 0.739 |
Rv3684ko | 1.52 | 0.498 |
delta_otsA_trehalose | -0.045 | -1.604 |