Top 10 genes with highest correlation to Rv3375/amiD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2238c/ahpE | (cc=0.5029) | info on Rv2238c/ahpE |
| Rv2636/- | (cc=0.4975) | info on Rv2636/- |
| Rv3435c/- | (cc=0.4944) | info on Rv3435c/- |
| Rv0071/- | (cc=0.4868) | info on Rv0071/- |
| Rv1156/- | (cc=0.4736) | info on Rv1156/- |
| Rv1442/bisC | (cc=0.4697) | info on Rv1442/bisC |
| Rv0995/rimJ | (cc=0.4561) | info on Rv0995/rimJ |
| Rv0857/- | (cc=0.4517) | info on Rv0857/- |
| Rv3641c/fic | (cc=0.4455) | info on Rv3641c/fic |
| Rv0730/- | (cc=0.4373) | info on Rv0730/- |
Correlation of Rv3375/amiD with Rv3435c/-
Normalized LFCs for Rv3375/amiD:
(description and provenance of datasets)
| Rv3375/amiD | Rv3435c/- | |
| Fe_supp_jason_reseq | 0.15 | 0.38 |
| low_pH_jason_reseq | -0.622 | -1.606 |
| NO_jason_reseq | 0.845 | 0.121 |
| B6_jason_reseq | 0.996 | 0.311 |
| MHCII_jason_reseq | 0.912 | 0.701 |
| Isoniazid02 | -0.08 | -1.359 |
| Rifampicin4 | -0.639 | -1.107 |
| Ethambutol3 | 0.632 | -0.049 |
| Meropenem3 | -0.718 | -1.004 |
| Vancomycin16 | -0.072 | -0.939 |
| Rv2680_day32 | 0.947 | -0.409 |
| H37Rv_KO_MarP | 0.852 | 0.488 |
| hypoxia_3wks | -0.347 | -0.542 |
| hypoxia_6wks | -0.328 | -1.071 |
| glycerol | 0.11 | -0.881 |
| cholesterol | 0.276 | 0.151 |
| AJ | -0.237 | 0.121 |
| Bibs02 | -0.427 | -0.164 |
| Bibs02c | 0.086 | 0.385 |
| BL6 | -0.228 | -0.322 |
| BL6a | -0.798 | -0.235 |
| BXD01 | -0.473 | -0.501 |
| BXD010 | -0.44 | -0.232 |
| BXD011 | -0.71 | -0.345 |
| BXD03 | -1.204 | -0.232 |
| BXD04 | -0.205 | -0.519 |
| BXD05 | -0.386 | -0.323 |
| BXD06 | -0.116 | -0.683 |
| BXD07 | -0.185 | -0.318 |
| BXD08 | -0.287 | -0.516 |
| BXD09 | -0.625 | -0.487 |
| CAST | -0.459 | 0.235 |
| CCcont | -0.223 | -0.363 |
| DS01 | 0.279 | 0.275 |
| DS02 | 0.257 | -0.339 |
| DS04 | -0.141 | 0.174 |
| DS0c | 0.72 | -0.03 |
| GP01 | -0.378 | 0.041 |
| GP02 | -0.072 | 0.585 |
| GP0c | -0.635 | -0.572 |
| NOD | 1.564 | 1.434 |
| NZO | -0.331 | 0.721 |
| PWK | -0.261 | 0.361 |
| H37Rv_KO_CtpC | -0.269 | 0.034 |
| H37Rv_KO_CtpD | 0.166 | 0.429 |
| H37Rv_KO_Rv1272 | -1.351 | -0.065 |
| H37Rv_KO_SugABC | 0.433 | 0.359 |
| H37Rv_KO_MbtN | -0.188 | -0.914 |
| Trans05 | -0.195 | 0.396 |
| macrophage_unactivated | 1.045 | -0.726 |
| IL1 | -0.214 | -0.24 |
| Rapamycin | -0.144 | -0.433 |
| Tcell | -1.01 | -0.802 |
| GMCSF | -0.319 | 0.013 |
| IFNab | -0.366 | -0.713 |
| IFNg | -0.061 | -0.417 |
| IFNg_GMCSF1 | 0.283 | 0.324 |
| Rv1432_day32 | -0.293 | -0.349 |
| Rv1565c_day32 | 0.479 | 0.107 |
| secA2_input | -0.398 | 0.081 |
| delta_Rv3594 | 0.373 | -0.349 |
| delta_Rv3717 | -0.303 | -0.2 |
| delta_Rv3811 | -0.32 | -0.41 |
| delta_Rv0954 | 0.216 | 0.576 |
| PonA1 | -1.18 | -0.435 |
| EccD1_KO | -0.128 | -0.454 |
| EspI_KO | -0.225 | -0.468 |
| PE35_KO | -0.802 | -0.554 |
| PPE68_KO | -0.88 | -0.595 |
| glycerol2 | 0.167 | 0.741 |
| lignocerate | 0.48 | 0.494 |
| oleate | 0.373 | 0.686 |
| phosphatidylcholine | 0.368 | 1.046 |
| acetate | 0.198 | 0.539 |
| glucAc | 0.424 | 0.105 |
| Rv0950ko | -1.019 | -0.036 |
| Rv1096ko | 0.492 | -0.214 |
| Rv3684ko | -0.291 | -0.553 |
| delta_otsA_trehalose | 0.718 | 1.447 |