Top 10 genes with highest correlation to Rv3375/amiD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2238c/ahpE | (cc=0.5029) | info on Rv2238c/ahpE |
| Rv2636/- | (cc=0.4975) | info on Rv2636/- |
| Rv3435c/- | (cc=0.4944) | info on Rv3435c/- |
| Rv0071/- | (cc=0.4868) | info on Rv0071/- |
| Rv1156/- | (cc=0.4736) | info on Rv1156/- |
| Rv1442/bisC | (cc=0.4697) | info on Rv1442/bisC |
| Rv0995/rimJ | (cc=0.4561) | info on Rv0995/rimJ |
| Rv0857/- | (cc=0.4517) | info on Rv0857/- |
| Rv3641c/fic | (cc=0.4455) | info on Rv3641c/fic |
| Rv0730/- | (cc=0.4373) | info on Rv0730/- |
Correlation of Rv3375/amiD with Rv0995/rimJ
Normalized LFCs for Rv3375/amiD:
(description and provenance of datasets)
| Rv3375/amiD | Rv0995/rimJ | |
| Fe_supp_jason_reseq | 0.15 | -0.153 |
| low_pH_jason_reseq | -0.622 | -2.916 |
| NO_jason_reseq | 0.845 | -1.205 |
| B6_jason_reseq | 0.996 | -0.085 |
| MHCII_jason_reseq | 0.912 | 0.516 |
| Isoniazid02 | -0.08 | -3.312 |
| Rifampicin4 | -0.639 | -4.318 |
| Ethambutol3 | 0.632 | -2.203 |
| Meropenem3 | -0.718 | -4.081 |
| Vancomycin16 | -0.072 | -5.515 |
| Rv2680_day32 | 0.947 | 0.564 |
| H37Rv_KO_MarP | 0.852 | 2.697 |
| hypoxia_3wks | -0.347 | -1.683 |
| hypoxia_6wks | -0.328 | -2.322 |
| glycerol | 0.11 | 1.712 |
| cholesterol | 0.276 | 0.212 |
| AJ | -0.237 | 0.528 |
| Bibs02 | -0.427 | -0.909 |
| Bibs02c | 0.086 | -0.671 |
| BL6 | -0.228 | -1.044 |
| BL6a | -0.798 | -2.444 |
| BXD01 | -0.473 | -2.009 |
| BXD010 | -0.44 | -0.323 |
| BXD011 | -0.71 | -2.143 |
| BXD03 | -1.204 | -0.672 |
| BXD04 | -0.205 | -1.948 |
| BXD05 | -0.386 | -2.668 |
| BXD06 | -0.116 | -1.975 |
| BXD07 | -0.185 | -1.549 |
| BXD08 | -0.287 | -2.096 |
| BXD09 | -0.625 | -1.635 |
| CAST | -0.459 | 0.085 |
| CCcont | -0.223 | 0.842 |
| DS01 | 0.279 | 0.186 |
| DS02 | 0.257 | 1.038 |
| DS04 | -0.141 | -0.229 |
| DS0c | 0.72 | 1.651 |
| GP01 | -0.378 | 0.254 |
| GP02 | -0.072 | -1.134 |
| GP0c | -0.635 | -1.454 |
| NOD | 1.564 | 2.756 |
| NZO | -0.331 | -0.288 |
| PWK | -0.261 | -0.861 |
| H37Rv_KO_CtpC | -0.269 | 0.562 |
| H37Rv_KO_CtpD | 0.166 | -0.513 |
| H37Rv_KO_Rv1272 | -1.351 | -1.962 |
| H37Rv_KO_SugABC | 0.433 | -0.204 |
| H37Rv_KO_MbtN | -0.188 | -1.994 |
| Trans05 | -0.195 | -1.434 |
| macrophage_unactivated | 1.045 | -0.464 |
| IL1 | -0.214 | -2.21 |
| Rapamycin | -0.144 | -2.286 |
| Tcell | -1.01 | -2.18 |
| GMCSF | -0.319 | -3.028 |
| IFNab | -0.366 | -3.625 |
| IFNg | -0.061 | -2.55 |
| IFNg_GMCSF1 | 0.283 | -0.71 |
| Rv1432_day32 | -0.293 | -0.139 |
| Rv1565c_day32 | 0.479 | 2.685 |
| secA2_input | -0.398 | -0.049 |
| delta_Rv3594 | 0.373 | -0.364 |
| delta_Rv3717 | -0.303 | -1.807 |
| delta_Rv3811 | -0.32 | 0.135 |
| delta_Rv0954 | 0.216 | 1.467 |
| PonA1 | -1.18 | 0.651 |
| EccD1_KO | -0.128 | -1.246 |
| EspI_KO | -0.225 | 0.724 |
| PE35_KO | -0.802 | 0.423 |
| PPE68_KO | -0.88 | -1.961 |
| glycerol2 | 0.167 | 0.383 |
| lignocerate | 0.48 | 3.231 |
| oleate | 0.373 | -1.934 |
| phosphatidylcholine | 0.368 | 2.522 |
| acetate | 0.198 | 1.82 |
| glucAc | 0.424 | 1.876 |
| Rv0950ko | -1.019 | -0.1 |
| Rv1096ko | 0.492 | 0.464 |
| Rv3684ko | -0.291 | 1.251 |
| delta_otsA_trehalose | 0.718 | -0.788 |