Top 10 genes with highest correlation to Rv3375/amiD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2238c/ahpE | (cc=0.5029) | info on Rv2238c/ahpE |
| Rv2636/- | (cc=0.4975) | info on Rv2636/- |
| Rv3435c/- | (cc=0.4944) | info on Rv3435c/- |
| Rv0071/- | (cc=0.4868) | info on Rv0071/- |
| Rv1156/- | (cc=0.4736) | info on Rv1156/- |
| Rv1442/bisC | (cc=0.4697) | info on Rv1442/bisC |
| Rv0995/rimJ | (cc=0.4561) | info on Rv0995/rimJ |
| Rv0857/- | (cc=0.4517) | info on Rv0857/- |
| Rv3641c/fic | (cc=0.4455) | info on Rv3641c/fic |
| Rv0730/- | (cc=0.4373) | info on Rv0730/- |
Correlation of Rv3375/amiD with Rv0071/-
Normalized LFCs for Rv3375/amiD:
(description and provenance of datasets)
| Rv3375/amiD | Rv0071/- | |
| Fe_supp_jason_reseq | 0.15 | 0.624 |
| low_pH_jason_reseq | -0.622 | -0.139 |
| NO_jason_reseq | 0.845 | 0.517 |
| B6_jason_reseq | 0.996 | 1.764 |
| MHCII_jason_reseq | 0.912 | 1.675 |
| Isoniazid02 | -0.08 | 0.073 |
| Rifampicin4 | -0.639 | 0.75 |
| Ethambutol3 | 0.632 | 1.131 |
| Meropenem3 | -0.718 | 0.694 |
| Vancomycin16 | -0.072 | 0.218 |
| Rv2680_day32 | 0.947 | 1.537 |
| H37Rv_KO_MarP | 0.852 | 0.059 |
| hypoxia_3wks | -0.347 | -0.152 |
| hypoxia_6wks | -0.328 | -0.182 |
| glycerol | 0.11 | 1.16 |
| cholesterol | 0.276 | 1.207 |
| AJ | -0.237 | -0.504 |
| Bibs02 | -0.427 | 0.474 |
| Bibs02c | 0.086 | 0.887 |
| BL6 | -0.228 | 0.441 |
| BL6a | -0.798 | -0.265 |
| BXD01 | -0.473 | -0.919 |
| BXD010 | -0.44 | -0.781 |
| BXD011 | -0.71 | -0.745 |
| BXD03 | -1.204 | -1.044 |
| BXD04 | -0.205 | -0.664 |
| BXD05 | -0.386 | -0.091 |
| BXD06 | -0.116 | -0.636 |
| BXD07 | -0.185 | -0.722 |
| BXD08 | -0.287 | -0.8 |
| BXD09 | -0.625 | -0.69 |
| CAST | -0.459 | 0.235 |
| CCcont | -0.223 | -0.342 |
| DS01 | 0.279 | 0.301 |
| DS02 | 0.257 | 0.767 |
| DS04 | -0.141 | 0.51 |
| DS0c | 0.72 | -0.093 |
| GP01 | -0.378 | -2.601 |
| GP02 | -0.072 | -2.703 |
| GP0c | -0.635 | -1.661 |
| NOD | 1.564 | 1.694 |
| NZO | -0.331 | 0.027 |
| PWK | -0.261 | 0.443 |
| H37Rv_KO_CtpC | -0.269 | 0.0 |
| H37Rv_KO_CtpD | 0.166 | 0.247 |
| H37Rv_KO_Rv1272 | -1.351 | -0.757 |
| H37Rv_KO_SugABC | 0.433 | -0.655 |
| H37Rv_KO_MbtN | -0.188 | -0.546 |
| Trans05 | -0.195 | -0.911 |
| macrophage_unactivated | 1.045 | 0.085 |
| IL1 | -0.214 | 0.181 |
| Rapamycin | -0.144 | 0.779 |
| Tcell | -1.01 | -0.088 |
| GMCSF | -0.319 | 0.671 |
| IFNab | -0.366 | -0.366 |
| IFNg | -0.061 | -0.171 |
| IFNg_GMCSF1 | 0.283 | 0.776 |
| Rv1432_day32 | -0.293 | 0.426 |
| Rv1565c_day32 | 0.479 | 1.978 |
| secA2_input | -0.398 | 1.85 |
| delta_Rv3594 | 0.373 | -0.136 |
| delta_Rv3717 | -0.303 | -0.409 |
| delta_Rv3811 | -0.32 | -0.201 |
| delta_Rv0954 | 0.216 | 0.828 |
| PonA1 | -1.18 | 0.177 |
| EccD1_KO | -0.128 | -1.727 |
| EspI_KO | -0.225 | -1.931 |
| PE35_KO | -0.802 | -1.248 |
| PPE68_KO | -0.88 | -1.017 |
| glycerol2 | 0.167 | 0.422 |
| lignocerate | 0.48 | 0.559 |
| oleate | 0.373 | -0.903 |
| phosphatidylcholine | 0.368 | 0.172 |
| acetate | 0.198 | 0.321 |
| glucAc | 0.424 | 0.587 |
| Rv0950ko | -1.019 | 0.066 |
| Rv1096ko | 0.492 | 0.709 |
| Rv3684ko | -0.291 | -0.072 |
| delta_otsA_trehalose | 0.718 | 1.156 |