Top 10 genes with highest correlation to Rv3375/amiD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2238c/ahpE | (cc=0.5029) | info on Rv2238c/ahpE |
| Rv2636/- | (cc=0.4975) | info on Rv2636/- |
| Rv3435c/- | (cc=0.4944) | info on Rv3435c/- |
| Rv0071/- | (cc=0.4868) | info on Rv0071/- |
| Rv1156/- | (cc=0.4736) | info on Rv1156/- |
| Rv1442/bisC | (cc=0.4697) | info on Rv1442/bisC |
| Rv0995/rimJ | (cc=0.4561) | info on Rv0995/rimJ |
| Rv0857/- | (cc=0.4517) | info on Rv0857/- |
| Rv3641c/fic | (cc=0.4455) | info on Rv3641c/fic |
| Rv0730/- | (cc=0.4373) | info on Rv0730/- |
Correlation of Rv3375/amiD with Rv2238c/ahpE
Normalized LFCs for Rv3375/amiD:
(description and provenance of datasets)
| Rv3375/amiD | Rv2238c/ahpE | |
| Fe_supp_jason_reseq | 0.15 | 2.038 |
| low_pH_jason_reseq | -0.622 | -1.432 |
| NO_jason_reseq | 0.845 | 1.04 |
| B6_jason_reseq | 0.996 | 2.593 |
| MHCII_jason_reseq | 0.912 | 0.036 |
| Isoniazid02 | -0.08 | 0.861 |
| Rifampicin4 | -0.639 | 0.761 |
| Ethambutol3 | 0.632 | 0.72 |
| Meropenem3 | -0.718 | -0.081 |
| Vancomycin16 | -0.072 | -0.78 |
| Rv2680_day32 | 0.947 | -0.459 |
| H37Rv_KO_MarP | 0.852 | 0.358 |
| hypoxia_3wks | -0.347 | -1.898 |
| hypoxia_6wks | -0.328 | -1.733 |
| glycerol | 0.11 | 0.312 |
| cholesterol | 0.276 | 0.605 |
| AJ | -0.237 | -0.983 |
| Bibs02 | -0.427 | -0.26 |
| Bibs02c | 0.086 | -2.739 |
| BL6 | -0.228 | -2.406 |
| BL6a | -0.798 | -1.913 |
| BXD01 | -0.473 | -2.376 |
| BXD010 | -0.44 | -2.463 |
| BXD011 | -0.71 | -0.987 |
| BXD03 | -1.204 | -2.467 |
| BXD04 | -0.205 | -2.143 |
| BXD05 | -0.386 | -1.762 |
| BXD06 | -0.116 | -2.567 |
| BXD07 | -0.185 | -1.523 |
| BXD08 | -0.287 | -1.821 |
| BXD09 | -0.625 | -2.209 |
| CAST | -0.459 | -0.757 |
| CCcont | -0.223 | -2.724 |
| DS01 | 0.279 | 0.039 |
| DS02 | 0.257 | 0.271 |
| DS04 | -0.141 | -0.389 |
| DS0c | 0.72 | 0.679 |
| GP01 | -0.378 | -1.629 |
| GP02 | -0.072 | -1.442 |
| GP0c | -0.635 | -2.145 |
| NOD | 1.564 | -0.542 |
| NZO | -0.331 | 0.364 |
| PWK | -0.261 | 0.244 |
| H37Rv_KO_CtpC | -0.269 | -0.169 |
| H37Rv_KO_CtpD | 0.166 | 0.177 |
| H37Rv_KO_Rv1272 | -1.351 | -1.619 |
| H37Rv_KO_SugABC | 0.433 | -1.297 |
| H37Rv_KO_MbtN | -0.188 | -0.207 |
| Trans05 | -0.195 | -1.566 |
| macrophage_unactivated | 1.045 | -0.83 |
| IL1 | -0.214 | -0.78 |
| Rapamycin | -0.144 | -0.807 |
| Tcell | -1.01 | -0.411 |
| GMCSF | -0.319 | -0.333 |
| IFNab | -0.366 | -0.381 |
| IFNg | -0.061 | -0.703 |
| IFNg_GMCSF1 | 0.283 | 2.951 |
| Rv1432_day32 | -0.293 | 0.0 |
| Rv1565c_day32 | 0.479 | 0.0 |
| secA2_input | -0.398 | -3.478 |
| delta_Rv3594 | 0.373 | -1.576 |
| delta_Rv3717 | -0.303 | -1.198 |
| delta_Rv3811 | -0.32 | -2.492 |
| delta_Rv0954 | 0.216 | -1.206 |
| PonA1 | -1.18 | -1.309 |
| EccD1_KO | -0.128 | -0.204 |
| EspI_KO | -0.225 | -1.877 |
| PE35_KO | -0.802 | -2.208 |
| PPE68_KO | -0.88 | -2.208 |
| glycerol2 | 0.167 | 0.0 |
| lignocerate | 0.48 | 0.0 |
| oleate | 0.373 | 0.0 |
| phosphatidylcholine | 0.368 | 0.0 |
| acetate | 0.198 | 0.0 |
| glucAc | 0.424 | 0.0 |
| Rv0950ko | -1.019 | -0.425 |
| Rv1096ko | 0.492 | 0.911 |
| Rv3684ko | -0.291 | -1.11 |
| delta_otsA_trehalose | 0.718 | 1.131 |