Top 10 genes with highest correlation to Rv3370c/dnaE2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1065/- | (cc=0.5386) | info on Rv1065/- |
| Rv3585/radA | (cc=0.5088) | info on Rv3585/radA |
| Rv1290c/- | (cc=0.4867) | info on Rv1290c/- |
| Rv0976c/- | (cc=0.4842) | info on Rv0976c/- |
| Rv1791/PE19 | (cc=0.4656) | info on Rv1791/PE19 |
| Rv3866/espG1 | (cc=0.4499) | info on Rv3866/espG1 |
| Rv3174/- | (cc=0.4466) | info on Rv3174/- |
| Rv0532/PE_PGRS6 | (cc=0.4446) | info on Rv0532/PE_PGRS6 |
| Rv1785c/cyp143 | (cc=0.4438) | info on Rv1785c/cyp143 |
| Rv0869c/moaA2 | (cc=0.4386) | info on Rv0869c/moaA2 |
Correlation of Rv3370c/dnaE2 with Rv1791/PE19
Normalized LFCs for Rv3370c/dnaE2:
(description and provenance of datasets)
| Rv3370c/dnaE2 | Rv1791/PE19 | |
| Fe_supp_jason_reseq | -0.33 | -0.134 |
| low_pH_jason_reseq | 0.353 | -0.07 |
| NO_jason_reseq | 0.042 | 2.515 |
| B6_jason_reseq | -0.83 | -3.115 |
| MHCII_jason_reseq | 0.062 | -2.374 |
| Isoniazid02 | 1.292 | 6.0 |
| Rifampicin4 | 0.441 | -1.004 |
| Ethambutol3 | 2.253 | 2.723 |
| Meropenem3 | 1.745 | 6.0 |
| Vancomycin16 | 0.276 | -3.39 |
| Rv2680_day32 | -0.442 | -0.249 |
| H37Rv_KO_MarP | 0.721 | 1.823 |
| hypoxia_3wks | -0.299 | -2.727 |
| hypoxia_6wks | -0.731 | -4.232 |
| glycerol | 0.6 | -1.017 |
| cholesterol | 0.322 | -1.853 |
| AJ | 0.328 | -2.526 |
| Bibs02 | -0.517 | -2.339 |
| Bibs02c | -0.211 | -2.102 |
| BL6 | 0.25 | -1.6 |
| BL6a | -0.112 | -0.722 |
| BXD01 | 0.168 | -0.866 |
| BXD010 | 0.313 | -1.51 |
| BXD011 | -0.383 | -0.641 |
| BXD03 | 0.315 | -0.493 |
| BXD04 | 0.302 | -1.243 |
| BXD05 | 0.442 | -0.49 |
| BXD06 | -0.24 | -1.238 |
| BXD07 | -0.038 | -1.508 |
| BXD08 | -0.018 | -1.702 |
| BXD09 | 0.181 | -1.798 |
| CAST | 0.325 | -2.508 |
| CCcont | 0.119 | 2.734 |
| DS01 | -0.625 | -3.022 |
| DS02 | 0.145 | -1.861 |
| DS04 | 0.027 | -0.977 |
| DS0c | -0.574 | -2.775 |
| GP01 | 0.585 | 2.594 |
| GP02 | 0.426 | 3.204 |
| GP0c | 0.598 | 2.968 |
| NOD | -0.194 | -2.874 |
| NZO | 0.42 | -2.552 |
| PWK | -0.519 | -0.715 |
| H37Rv_KO_CtpC | 0.581 | -0.818 |
| H37Rv_KO_CtpD | 0.267 | -0.518 |
| H37Rv_KO_Rv1272 | 0.344 | -1.535 |
| H37Rv_KO_SugABC | 0.231 | 0.03 |
| H37Rv_KO_MbtN | -0.136 | 1.428 |
| Trans05 | 0.416 | -0.947 |
| macrophage_unactivated | 0.0 | -1.13 |
| IL1 | -0.151 | 0.762 |
| Rapamycin | 0.049 | -0.11 |
| Tcell | 0.052 | 1.867 |
| GMCSF | 1.03 | -0.095 |
| IFNab | -0.154 | -0.447 |
| IFNg | -0.275 | -0.396 |
| IFNg_GMCSF1 | 0.852 | -0.591 |
| Rv1432_day32 | 0.038 | -2.568 |
| Rv1565c_day32 | -0.371 | -0.766 |
| secA2_input | 0.207 | 1.493 |
| delta_Rv3594 | 0.211 | -0.821 |
| delta_Rv3717 | -0.023 | 0.018 |
| delta_Rv3811 | 0.3 | -0.418 |
| delta_Rv0954 | 0.156 | 0.226 |
| PonA1 | 0.196 | -4.903 |
| EccD1_KO | 0.214 | -3.772 |
| EspI_KO | -0.145 | -5.136 |
| PE35_KO | 0.327 | -4.466 |
| PPE68_KO | 0.688 | -1.27 |
| glycerol2 | 0.177 | 1.77 |
| lignocerate | 0.313 | 0.0 |
| oleate | 0.364 | 0.537 |
| phosphatidylcholine | 0.293 | 1.188 |
| acetate | 0.238 | 1.539 |
| glucAc | -0.02 | 0.605 |
| Rv0950ko | 0.567 | 0.938 |
| Rv1096ko | 1.155 | -2.268 |
| Rv3684ko | 0.563 | -1.028 |
| delta_otsA_trehalose | -0.321 | 0.878 |