Top 10 genes with highest correlation to Rv3370c/dnaE2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1065/- | (cc=0.5386) | info on Rv1065/- |
| Rv3585/radA | (cc=0.5088) | info on Rv3585/radA |
| Rv1290c/- | (cc=0.4867) | info on Rv1290c/- |
| Rv0976c/- | (cc=0.4842) | info on Rv0976c/- |
| Rv1791/PE19 | (cc=0.4656) | info on Rv1791/PE19 |
| Rv3866/espG1 | (cc=0.4499) | info on Rv3866/espG1 |
| Rv3174/- | (cc=0.4466) | info on Rv3174/- |
| Rv0532/PE_PGRS6 | (cc=0.4446) | info on Rv0532/PE_PGRS6 |
| Rv1785c/cyp143 | (cc=0.4438) | info on Rv1785c/cyp143 |
| Rv0869c/moaA2 | (cc=0.4386) | info on Rv0869c/moaA2 |
Correlation of Rv3370c/dnaE2 with Rv1065/-
Normalized LFCs for Rv3370c/dnaE2:
(description and provenance of datasets)
| Rv3370c/dnaE2 | Rv1065/- | |
| Fe_supp_jason_reseq | -0.33 | -0.085 |
| low_pH_jason_reseq | 0.353 | -0.773 |
| NO_jason_reseq | 0.042 | -0.16 |
| B6_jason_reseq | -0.83 | -3.079 |
| MHCII_jason_reseq | 0.062 | -2.083 |
| Isoniazid02 | 1.292 | -0.007 |
| Rifampicin4 | 0.441 | 0.014 |
| Ethambutol3 | 2.253 | 1.204 |
| Meropenem3 | 1.745 | 0.272 |
| Vancomycin16 | 0.276 | -0.167 |
| Rv2680_day32 | -0.442 | -0.561 |
| H37Rv_KO_MarP | 0.721 | 0.113 |
| hypoxia_3wks | -0.299 | 0.191 |
| hypoxia_6wks | -0.731 | -0.228 |
| glycerol | 0.6 | 0.268 |
| cholesterol | 0.322 | -1.007 |
| AJ | 0.328 | -1.382 |
| Bibs02 | -0.517 | -2.387 |
| Bibs02c | -0.211 | -2.102 |
| BL6 | 0.25 | -0.413 |
| BL6a | -0.112 | -1.652 |
| BXD01 | 0.168 | -1.005 |
| BXD010 | 0.313 | -1.373 |
| BXD011 | -0.383 | -0.676 |
| BXD03 | 0.315 | -0.576 |
| BXD04 | 0.302 | -0.736 |
| BXD05 | 0.442 | -0.852 |
| BXD06 | -0.24 | -1.101 |
| BXD07 | -0.038 | -1.261 |
| BXD08 | -0.018 | -1.365 |
| BXD09 | 0.181 | -1.239 |
| CAST | 0.325 | -2.364 |
| CCcont | 0.119 | -0.674 |
| DS01 | -0.625 | -3.374 |
| DS02 | 0.145 | -1.344 |
| DS04 | 0.027 | -3.485 |
| DS0c | -0.574 | -2.863 |
| GP01 | 0.585 | 0.052 |
| GP02 | 0.426 | 0.431 |
| GP0c | 0.598 | 0.084 |
| NOD | -0.194 | -2.184 |
| NZO | 0.42 | -0.825 |
| PWK | -0.519 | -1.272 |
| H37Rv_KO_CtpC | 0.581 | -0.967 |
| H37Rv_KO_CtpD | 0.267 | -0.999 |
| H37Rv_KO_Rv1272 | 0.344 | -0.61 |
| H37Rv_KO_SugABC | 0.231 | -0.705 |
| H37Rv_KO_MbtN | -0.136 | -0.452 |
| Trans05 | 0.416 | -0.416 |
| macrophage_unactivated | 0.0 | -0.533 |
| IL1 | -0.151 | -0.786 |
| Rapamycin | 0.049 | -0.055 |
| Tcell | 0.052 | -0.485 |
| GMCSF | 1.03 | 0.591 |
| IFNab | -0.154 | -0.354 |
| IFNg | -0.275 | -0.69 |
| IFNg_GMCSF1 | 0.852 | -0.386 |
| Rv1432_day32 | 0.038 | -1.091 |
| Rv1565c_day32 | -0.371 | -0.834 |
| secA2_input | 0.207 | 1.032 |
| delta_Rv3594 | 0.211 | -1.017 |
| delta_Rv3717 | -0.023 | -0.296 |
| delta_Rv3811 | 0.3 | -0.219 |
| delta_Rv0954 | 0.156 | -1.353 |
| PonA1 | 0.196 | -0.3 |
| EccD1_KO | 0.214 | -0.25 |
| EspI_KO | -0.145 | 0.043 |
| PE35_KO | 0.327 | -0.292 |
| PPE68_KO | 0.688 | -0.144 |
| glycerol2 | 0.177 | -0.149 |
| lignocerate | 0.313 | -0.032 |
| oleate | 0.364 | 0.128 |
| phosphatidylcholine | 0.293 | 0.455 |
| acetate | 0.238 | 0.0 |
| glucAc | -0.02 | -0.187 |
| Rv0950ko | 0.567 | -0.087 |
| Rv1096ko | 1.155 | 0.169 |
| Rv3684ko | 0.563 | 0.069 |
| delta_otsA_trehalose | -0.321 | -0.524 |