Top 10 genes with highest correlation to Rv3366/spoU:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0008c/- | (cc=0.6926) | info on Rv0008c/- |
| Rv3295/- | (cc=0.6512) | info on Rv3295/- |
| Rv0359/- | (cc=0.6507) | info on Rv0359/- |
| Rv0110/- | (cc=0.6478) | info on Rv0110/- |
| Rv2638/- | (cc=0.6467) | info on Rv2638/- |
| Rv3353c/- | (cc=0.6322) | info on Rv3353c/- |
| Rv1834/lipZ | (cc=0.6237) | info on Rv1834/lipZ |
| Rv2405/- | (cc=0.6165) | info on Rv2405/- |
| Rv0376c/- | (cc=0.5989) | info on Rv0376c/- |
| Rv3354/- | (cc=0.5923) | info on Rv3354/- |
Correlation of Rv3366/spoU with Rv3354/-
Normalized LFCs for Rv3366/spoU:
(description and provenance of datasets)
| Rv3366/spoU | Rv3354/- | |
| Fe_supp_jason_reseq | -1.345 | -1.138 |
| low_pH_jason_reseq | -1.36 | -0.381 |
| NO_jason_reseq | 0.94 | -0.793 |
| B6_jason_reseq | 0.179 | 0.985 |
| MHCII_jason_reseq | 0.919 | 1.019 |
| Isoniazid02 | -0.556 | 1.043 |
| Rifampicin4 | 0.793 | 0.125 |
| Ethambutol3 | -0.154 | 0.398 |
| Meropenem3 | 0.381 | 1.179 |
| Vancomycin16 | -0.138 | 0.162 |
| Rv2680_day32 | -0.683 | 0.659 |
| H37Rv_KO_MarP | 1.012 | 0.422 |
| hypoxia_3wks | -0.463 | -0.347 |
| hypoxia_6wks | -0.662 | -0.595 |
| glycerol | 0.563 | 0.674 |
| cholesterol | -0.44 | 0.892 |
| AJ | -0.081 | -0.171 |
| Bibs02 | -0.162 | -0.029 |
| Bibs02c | -0.142 | 0.596 |
| BL6 | -0.081 | -0.912 |
| BL6a | -1.045 | -0.067 |
| BXD01 | -1.875 | -1.687 |
| BXD010 | -1.722 | -1.434 |
| BXD011 | -1.305 | -2.812 |
| BXD03 | -1.743 | -2.487 |
| BXD04 | -1.927 | -1.729 |
| BXD05 | -0.858 | -1.146 |
| BXD06 | -1.423 | -1.932 |
| BXD07 | -2.32 | -2.262 |
| BXD08 | -0.595 | -1.667 |
| BXD09 | -1.348 | -2.542 |
| CAST | 0.317 | 0.097 |
| CCcont | -1.909 | -1.82 |
| DS01 | -0.979 | -0.077 |
| DS02 | -0.922 | 0.269 |
| DS04 | -0.145 | 0.395 |
| DS0c | -0.94 | -0.597 |
| GP01 | 0.436 | -1.486 |
| GP02 | -1.308 | -0.295 |
| GP0c | -0.058 | -0.754 |
| NOD | -0.358 | -0.169 |
| NZO | 0.377 | 0.127 |
| PWK | 0.114 | 0.367 |
| H37Rv_KO_CtpC | -0.02 | -0.788 |
| H37Rv_KO_CtpD | -0.065 | -1.146 |
| H37Rv_KO_Rv1272 | -1.386 | -0.927 |
| H37Rv_KO_SugABC | 0.15 | -0.855 |
| H37Rv_KO_MbtN | -0.681 | -1.624 |
| Trans05 | -1.305 | -0.244 |
| macrophage_unactivated | -1.944 | -1.654 |
| IL1 | -2.115 | -1.649 |
| Rapamycin | -3.637 | -1.034 |
| Tcell | -1.522 | -1.473 |
| GMCSF | -1.426 | -2.118 |
| IFNab | -2.582 | -2.056 |
| IFNg | -2.138 | -0.949 |
| IFNg_GMCSF1 | -1.335 | -0.641 |
| Rv1432_day32 | -0.014 | 0.3 |
| Rv1565c_day32 | 0.916 | 0.635 |
| secA2_input | -0.833 | 0.645 |
| delta_Rv3594 | -2.145 | -0.395 |
| delta_Rv3717 | -0.545 | -0.21 |
| delta_Rv3811 | -0.568 | 0.592 |
| delta_Rv0954 | -1.344 | 0.58 |
| PonA1 | -0.68 | -0.802 |
| EccD1_KO | -0.355 | 1.217 |
| EspI_KO | 0.433 | 1.201 |
| PE35_KO | -1.811 | 0.204 |
| PPE68_KO | -2.358 | 1.254 |
| glycerol2 | 1.319 | 1.595 |
| lignocerate | 1.128 | 1.672 |
| oleate | -0.457 | 0.822 |
| phosphatidylcholine | 1.297 | 1.291 |
| acetate | 1.215 | 1.047 |
| glucAc | 1.557 | 1.449 |
| Rv0950ko | 1.963 | 0.365 |
| Rv1096ko | 1.215 | 0.268 |
| Rv3684ko | 2.227 | 0.933 |
| delta_otsA_trehalose | -1.723 | 0.808 |