Top 10 genes with highest correlation to Rv3366/spoU:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0008c/- | (cc=0.6926) | info on Rv0008c/- |
| Rv3295/- | (cc=0.6512) | info on Rv3295/- |
| Rv0359/- | (cc=0.6507) | info on Rv0359/- |
| Rv0110/- | (cc=0.6478) | info on Rv0110/- |
| Rv2638/- | (cc=0.6467) | info on Rv2638/- |
| Rv3353c/- | (cc=0.6322) | info on Rv3353c/- |
| Rv1834/lipZ | (cc=0.6237) | info on Rv1834/lipZ |
| Rv2405/- | (cc=0.6165) | info on Rv2405/- |
| Rv0376c/- | (cc=0.5989) | info on Rv0376c/- |
| Rv3354/- | (cc=0.5923) | info on Rv3354/- |
Correlation of Rv3366/spoU with Rv3295/-
Normalized LFCs for Rv3366/spoU:
(description and provenance of datasets)
| Rv3366/spoU | Rv3295/- | |
| Fe_supp_jason_reseq | -1.345 | -0.311 |
| low_pH_jason_reseq | -1.36 | -1.467 |
| NO_jason_reseq | 0.94 | 0.399 |
| B6_jason_reseq | 0.179 | 1.709 |
| MHCII_jason_reseq | 0.919 | 2.745 |
| Isoniazid02 | -0.556 | -0.08 |
| Rifampicin4 | 0.793 | -0.736 |
| Ethambutol3 | -0.154 | -0.766 |
| Meropenem3 | 0.381 | 1.594 |
| Vancomycin16 | -0.138 | -2.144 |
| Rv2680_day32 | -0.683 | -0.028 |
| H37Rv_KO_MarP | 1.012 | 0.872 |
| hypoxia_3wks | -0.463 | 0.04 |
| hypoxia_6wks | -0.662 | 0.069 |
| glycerol | 0.563 | -1.066 |
| cholesterol | -0.44 | -0.911 |
| AJ | -0.081 | -0.094 |
| Bibs02 | -0.162 | -0.197 |
| Bibs02c | -0.142 | -0.488 |
| BL6 | -0.081 | -1.617 |
| BL6a | -1.045 | -1.21 |
| BXD01 | -1.875 | -2.04 |
| BXD010 | -1.722 | -1.261 |
| BXD011 | -1.305 | -1.45 |
| BXD03 | -1.743 | -1.975 |
| BXD04 | -1.927 | -1.206 |
| BXD05 | -0.858 | -1.799 |
| BXD06 | -1.423 | -1.84 |
| BXD07 | -2.32 | -1.907 |
| BXD08 | -0.595 | -2.202 |
| BXD09 | -1.348 | -1.692 |
| CAST | 0.317 | -0.377 |
| CCcont | -1.909 | -2.55 |
| DS01 | -0.979 | -0.573 |
| DS02 | -0.922 | -0.243 |
| DS04 | -0.145 | -1.214 |
| DS0c | -0.94 | -0.159 |
| GP01 | 0.436 | -0.495 |
| GP02 | -1.308 | -1.862 |
| GP0c | -0.058 | -3.192 |
| NOD | -0.358 | 0.265 |
| NZO | 0.377 | 0.438 |
| PWK | 0.114 | -0.034 |
| H37Rv_KO_CtpC | -0.02 | -1.189 |
| H37Rv_KO_CtpD | -0.065 | -0.309 |
| H37Rv_KO_Rv1272 | -1.386 | -0.822 |
| H37Rv_KO_SugABC | 0.15 | -1.536 |
| H37Rv_KO_MbtN | -0.681 | -2.764 |
| Trans05 | -1.305 | -1.09 |
| macrophage_unactivated | -1.944 | -3.033 |
| IL1 | -2.115 | -2.637 |
| Rapamycin | -3.637 | -2.998 |
| Tcell | -1.522 | -2.77 |
| GMCSF | -1.426 | -2.389 |
| IFNab | -2.582 | -4.099 |
| IFNg | -2.138 | -1.86 |
| IFNg_GMCSF1 | -1.335 | -1.555 |
| Rv1432_day32 | -0.014 | 0.528 |
| Rv1565c_day32 | 0.916 | 1.414 |
| secA2_input | -0.833 | 0.819 |
| delta_Rv3594 | -2.145 | -0.159 |
| delta_Rv3717 | -0.545 | -0.35 |
| delta_Rv3811 | -0.568 | -0.437 |
| delta_Rv0954 | -1.344 | -0.012 |
| PonA1 | -0.68 | 0.697 |
| EccD1_KO | -0.355 | -0.536 |
| EspI_KO | 0.433 | -0.442 |
| PE35_KO | -1.811 | -0.096 |
| PPE68_KO | -2.358 | 0.067 |
| glycerol2 | 1.319 | 2.42 |
| lignocerate | 1.128 | 1.125 |
| oleate | -0.457 | -0.113 |
| phosphatidylcholine | 1.297 | 2.459 |
| acetate | 1.215 | 0.436 |
| glucAc | 1.557 | 0.323 |
| Rv0950ko | 1.963 | 1.019 |
| Rv1096ko | 1.215 | 0.338 |
| Rv3684ko | 2.227 | 0.907 |
| delta_otsA_trehalose | -1.723 | 0.261 |