Top 10 genes with highest correlation to Rv3366/spoU:
update plot | correlation | link to info on gene |
---|---|---|
Rv0008c/- | (cc=0.6926) | info on Rv0008c/- |
Rv3295/- | (cc=0.6512) | info on Rv3295/- |
Rv0359/- | (cc=0.6507) | info on Rv0359/- |
Rv0110/- | (cc=0.6478) | info on Rv0110/- |
Rv2638/- | (cc=0.6467) | info on Rv2638/- |
Rv3353c/- | (cc=0.6322) | info on Rv3353c/- |
Rv1834/lipZ | (cc=0.6237) | info on Rv1834/lipZ |
Rv2405/- | (cc=0.6165) | info on Rv2405/- |
Rv0376c/- | (cc=0.5989) | info on Rv0376c/- |
Rv3354/- | (cc=0.5923) | info on Rv3354/- |
Correlation of Rv3366/spoU with Rv0008c/-
Normalized LFCs for Rv3366/spoU:
(description and provenance of datasets)
Rv3366/spoU | Rv0008c/- | |
Fe_supp_jason_reseq | -1.345 | -2.052 |
low_pH_jason_reseq | -1.36 | -0.85 |
NO_jason_reseq | 0.94 | 1.575 |
B6_jason_reseq | 0.179 | 2.298 |
MHCII_jason_reseq | 0.919 | 1.965 |
Isoniazid02 | -0.556 | 0.56 |
Rifampicin4 | 0.793 | 0.412 |
Ethambutol3 | -0.154 | 0.27 |
Meropenem3 | 0.381 | -0.231 |
Vancomycin16 | -0.138 | 0.979 |
Rv2680_day32 | -0.683 | 0.0 |
H37Rv_KO_MarP | 1.012 | 0.113 |
hypoxia_3wks | -0.463 | -0.702 |
hypoxia_6wks | -0.662 | -0.1 |
glycerol | 0.563 | 0.856 |
cholesterol | -0.44 | 0.366 |
AJ | -0.081 | 0.449 |
Bibs02 | -0.162 | 1.347 |
Bibs02c | -0.142 | -0.973 |
BL6 | -0.081 | -0.648 |
BL6a | -1.045 | -3.221 |
BXD01 | -1.875 | -1.653 |
BXD010 | -1.722 | -2.357 |
BXD011 | -1.305 | -2.539 |
BXD03 | -1.743 | -1.169 |
BXD04 | -1.927 | -3.059 |
BXD05 | -0.858 | -0.609 |
BXD06 | -1.423 | -1.85 |
BXD07 | -2.32 | -1.757 |
BXD08 | -0.595 | -1.279 |
BXD09 | -1.348 | -1.863 |
CAST | 0.317 | 0.349 |
CCcont | -1.909 | -0.603 |
DS01 | -0.979 | 0.186 |
DS02 | -0.922 | -0.263 |
DS04 | -0.145 | 1.214 |
DS0c | -0.94 | -0.955 |
GP01 | 0.436 | 0.797 |
GP02 | -1.308 | -0.164 |
GP0c | -0.058 | 1.374 |
NOD | -0.358 | 0.762 |
NZO | 0.377 | -0.241 |
PWK | 0.114 | 0.965 |
H37Rv_KO_CtpC | -0.02 | -0.258 |
H37Rv_KO_CtpD | -0.065 | 1.101 |
H37Rv_KO_Rv1272 | -1.386 | 0.282 |
H37Rv_KO_SugABC | 0.15 | 0.062 |
H37Rv_KO_MbtN | -0.681 | -1.337 |
Trans05 | -1.305 | -1.893 |
macrophage_unactivated | -1.944 | -0.83 |
IL1 | -2.115 | -1.978 |
Rapamycin | -3.637 | -0.43 |
Tcell | -1.522 | -2.923 |
GMCSF | -1.426 | -1.993 |
IFNab | -2.582 | -2.283 |
IFNg | -2.138 | -3.127 |
IFNg_GMCSF1 | -1.335 | -1.034 |
Rv1432_day32 | -0.014 | 0.755 |
Rv1565c_day32 | 0.916 | 0.0 |
secA2_input | -0.833 | -2.232 |
delta_Rv3594 | -2.145 | 0.601 |
delta_Rv3717 | -0.545 | 1.058 |
delta_Rv3811 | -0.568 | -1.393 |
delta_Rv0954 | -1.344 | -0.368 |
PonA1 | -0.68 | 0.12 |
EccD1_KO | -0.355 | -0.362 |
EspI_KO | 0.433 | -0.893 |
PE35_KO | -1.811 | -0.248 |
PPE68_KO | -2.358 | 0.362 |
glycerol2 | 1.319 | 2.742 |
lignocerate | 1.128 | 3.004 |
oleate | -0.457 | 0.788 |
phosphatidylcholine | 1.297 | 2.22 |
acetate | 1.215 | 4.201 |
glucAc | 1.557 | 2.715 |
Rv0950ko | 1.963 | 1.158 |
Rv1096ko | 1.215 | 1.583 |
Rv3684ko | 2.227 | 2.103 |
delta_otsA_trehalose | -1.723 | 0.711 |