Top 10 genes with highest correlation to Rv3363c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1564c/treX | (cc=0.5751) | info on Rv1564c/treX |
| Rv3449/mycP4 | (cc=0.5712) | info on Rv3449/mycP4 |
| Rv3839/- | (cc=0.5477) | info on Rv3839/- |
| Rv2128/- | (cc=0.5268) | info on Rv2128/- |
| Rv3168/- | (cc=0.518) | info on Rv3168/- |
| Rv0526/- | (cc=0.5162) | info on Rv0526/- |
| Rv3455c/truA | (cc=0.5158) | info on Rv3455c/truA |
| Rv2909c/rpsP | (cc=0.5009) | info on Rv2909c/rpsP |
| Rv3710/leuA | (cc=0.5006) | info on Rv3710/leuA |
| Rv0592/mce2D | (cc=0.4948) | info on Rv0592/mce2D |
Correlation of Rv3363c/- with Rv2128/-
Normalized LFCs for Rv3363c/-:
(description and provenance of datasets)
| Rv3363c/- | Rv2128/- | |
| Fe_supp_jason_reseq | 0.289 | 1.972 |
| low_pH_jason_reseq | 0.775 | 1.355 |
| NO_jason_reseq | -0.63 | 0.284 |
| B6_jason_reseq | 0.575 | 1.181 |
| MHCII_jason_reseq | 0.795 | 1.022 |
| Isoniazid02 | 0.355 | -0.162 |
| Rifampicin4 | -1.194 | -0.734 |
| Ethambutol3 | -0.557 | 0.097 |
| Meropenem3 | -0.158 | 0.806 |
| Vancomycin16 | -0.172 | -0.828 |
| Rv2680_day32 | -0.786 | 0.241 |
| H37Rv_KO_MarP | 0.014 | -0.842 |
| hypoxia_3wks | -0.231 | -1.34 |
| hypoxia_6wks | 0.023 | -1.831 |
| glycerol | 0.408 | -0.13 |
| cholesterol | 0.45 | -0.637 |
| AJ | 0.079 | 0.703 |
| Bibs02 | 0.616 | -0.148 |
| Bibs02c | -0.821 | 0.402 |
| BL6 | 0.017 | -0.887 |
| BL6a | -0.25 | 0.529 |
| BXD01 | -0.374 | -0.924 |
| BXD010 | -0.073 | 0.27 |
| BXD011 | 0.018 | 0.604 |
| BXD03 | 0.449 | -0.677 |
| BXD04 | -0.044 | 1.188 |
| BXD05 | -0.137 | -0.215 |
| BXD06 | -0.136 | -0.021 |
| BXD07 | -0.12 | 0.063 |
| BXD08 | 0.01 | -0.142 |
| BXD09 | -0.222 | 0.305 |
| CAST | 0.506 | -0.41 |
| CCcont | -0.697 | -1.254 |
| DS01 | -0.51 | -1.466 |
| DS02 | -0.109 | 0.417 |
| DS04 | -1.105 | -1.123 |
| DS0c | -0.396 | -1.606 |
| GP01 | -1.314 | -2.407 |
| GP02 | -0.626 | -0.263 |
| GP0c | 0.162 | -1.904 |
| NOD | -0.096 | 0.052 |
| NZO | -0.465 | -0.877 |
| PWK | -0.142 | 0.512 |
| H37Rv_KO_CtpC | 0.252 | 0.462 |
| H37Rv_KO_CtpD | -1.654 | -0.25 |
| H37Rv_KO_Rv1272 | 0.584 | 1.962 |
| H37Rv_KO_SugABC | -0.14 | 0.144 |
| H37Rv_KO_MbtN | -0.538 | 0.263 |
| Trans05 | 1.0 | 1.251 |
| macrophage_unactivated | -0.448 | -0.906 |
| IL1 | 0.359 | 0.371 |
| Rapamycin | -0.322 | 0.709 |
| Tcell | -0.808 | -0.935 |
| GMCSF | -0.763 | -0.539 |
| IFNab | 0.0 | -0.868 |
| IFNg | 0.045 | -0.454 |
| IFNg_GMCSF1 | 0.666 | -2.338 |
| Rv1432_day32 | 1.076 | 0.18 |
| Rv1565c_day32 | -0.488 | -0.12 |
| secA2_input | -0.164 | -1.191 |
| delta_Rv3594 | -0.285 | -0.269 |
| delta_Rv3717 | -1.44 | -0.919 |
| delta_Rv3811 | -0.671 | -0.381 |
| delta_Rv0954 | -1.07 | -0.138 |
| PonA1 | -1.526 | -1.295 |
| EccD1_KO | 0.0 | 0.414 |
| EspI_KO | -1.047 | 1.221 |
| PE35_KO | -0.866 | -0.245 |
| PPE68_KO | -1.289 | -0.166 |
| glycerol2 | -2.812 | -2.935 |
| lignocerate | -1.844 | -1.894 |
| oleate | -2.2 | -2.04 |
| phosphatidylcholine | -2.286 | -2.703 |
| acetate | -2.276 | -1.483 |
| glucAc | -1.217 | -2.212 |
| Rv0950ko | 0.196 | -0.537 |
| Rv1096ko | 0.501 | -1.544 |
| Rv3684ko | -0.147 | -0.059 |
| delta_otsA_trehalose | 4.02 | 1.206 |