Top 10 genes with highest correlation to Rv3357/relJ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3749c/- | (cc=0.5817) | info on Rv3749c/- |
| Rv1356c/- | (cc=0.5394) | info on Rv1356c/- |
| Rv2287/yjcE | (cc=0.5222) | info on Rv2287/yjcE |
| Rv2253/- | (cc=0.5185) | info on Rv2253/- |
| Rv1913/- | (cc=0.4975) | info on Rv1913/- |
| Rv0187/- | (cc=0.4965) | info on Rv0187/- |
| Rv1956/higA | (cc=0.4963) | info on Rv1956/higA |
| Rv2506/- | (cc=0.4961) | info on Rv2506/- |
| Rv0182c/sigG | (cc=0.4893) | info on Rv0182c/sigG |
| Rv1316c/ogt | (cc=0.4767) | info on Rv1316c/ogt |
Correlation of Rv3357/relJ with Rv2253/-
Normalized LFCs for Rv3357/relJ:
(description and provenance of datasets)
| Rv3357/relJ | Rv2253/- | |
| Fe_supp_jason_reseq | 0.314 | -1.163 |
| low_pH_jason_reseq | 0.0 | -0.206 |
| NO_jason_reseq | 1.202 | -0.475 |
| B6_jason_reseq | 0.068 | -2.027 |
| MHCII_jason_reseq | -1.014 | -1.199 |
| Isoniazid02 | 0.963 | -0.095 |
| Rifampicin4 | 0.368 | -0.845 |
| Ethambutol3 | 0.561 | -0.304 |
| Meropenem3 | 1.057 | -0.432 |
| Vancomycin16 | 0.032 | -0.172 |
| Rv2680_day32 | 0.147 | 0.456 |
| H37Rv_KO_MarP | 0.56 | -0.167 |
| hypoxia_3wks | 0.175 | 0.167 |
| hypoxia_6wks | 1.048 | -0.867 |
| glycerol | -0.205 | -0.903 |
| cholesterol | -0.278 | -0.807 |
| AJ | 0.711 | 1.758 |
| Bibs02 | -0.605 | 0.719 |
| Bibs02c | -0.326 | -0.418 |
| BL6 | 0.143 | 0.656 |
| BL6a | 0.29 | -0.626 |
| BXD01 | 0.533 | 1.271 |
| BXD010 | 0.41 | 0.707 |
| BXD011 | -0.292 | 0.54 |
| BXD03 | -0.908 | 0.327 |
| BXD04 | -0.283 | 0.407 |
| BXD05 | -0.329 | 0.301 |
| BXD06 | 0.055 | 0.483 |
| BXD07 | -0.051 | 0.259 |
| BXD08 | 0.296 | 1.186 |
| BXD09 | -0.052 | 0.462 |
| CAST | -0.028 | 0.102 |
| CCcont | 0.895 | 1.443 |
| DS01 | 0.043 | 0.395 |
| DS02 | -0.386 | -0.495 |
| DS04 | -0.533 | 1.269 |
| DS0c | 0.789 | -0.823 |
| GP01 | -0.006 | -0.119 |
| GP02 | -0.477 | -0.603 |
| GP0c | -0.64 | -0.333 |
| NOD | 1.407 | 2.791 |
| NZO | 1.504 | 1.305 |
| PWK | 0.011 | -0.287 |
| H37Rv_KO_CtpC | -0.434 | 1.54 |
| H37Rv_KO_CtpD | 1.651 | 1.877 |
| H37Rv_KO_Rv1272 | -0.017 | 1.952 |
| H37Rv_KO_SugABC | 0.058 | 1.701 |
| H37Rv_KO_MbtN | 0.392 | 0.452 |
| Trans05 | 0.974 | 2.427 |
| macrophage_unactivated | 0.148 | 0.915 |
| IL1 | -1.771 | -1.077 |
| Rapamycin | -2.176 | -2.829 |
| Tcell | 0.551 | 1.049 |
| GMCSF | -2.936 | -2.857 |
| IFNab | -1.696 | -0.943 |
| IFNg | -0.032 | -0.703 |
| IFNg_GMCSF1 | -0.644 | -1.141 |
| Rv1432_day32 | 1.121 | 1.096 |
| Rv1565c_day32 | -0.174 | 0.141 |
| secA2_input | 0.872 | -0.366 |
| delta_Rv3594 | 0.161 | 0.445 |
| delta_Rv3717 | -0.477 | -0.505 |
| delta_Rv3811 | 0.748 | -0.152 |
| delta_Rv0954 | 0.65 | -0.668 |
| PonA1 | 0.852 | -0.32 |
| EccD1_KO | 0.408 | -0.125 |
| EspI_KO | 0.154 | 0.502 |
| PE35_KO | -0.353 | 0.417 |
| PPE68_KO | -0.339 | -0.246 |
| glycerol2 | 0.692 | 1.26 |
| lignocerate | 0.642 | 1.393 |
| oleate | 0.764 | 0.664 |
| phosphatidylcholine | 0.52 | 1.259 |
| acetate | -0.108 | 1.413 |
| glucAc | 0.383 | 0.939 |
| Rv0950ko | -0.338 | -0.576 |
| Rv1096ko | 0.92 | -1.007 |
| Rv3684ko | -1.041 | -0.626 |
| delta_otsA_trehalose | 0.466 | -0.026 |