Top 10 genes with highest correlation to Rv3327/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0797/- | (cc=0.6362) | info on Rv0797/- |
| Rv1360/- | (cc=0.5271) | info on Rv1360/- |
| Rv0577/TB27.3 | (cc=0.4917) | info on Rv0577/TB27.3 |
| Rv2701c/suhB | (cc=0.4872) | info on Rv2701c/suhB |
| Rv2285/- | (cc=0.4792) | info on Rv2285/- |
| Rv3309c/upp | (cc=0.4721) | info on Rv3309c/upp |
| Rv2406c/- | (cc=0.4589) | info on Rv2406c/- |
| Rv2615c/PE_PGRS45 | (cc=0.4568) | info on Rv2615c/PE_PGRS45 |
| Rv0747/PE_PGRS10 | (cc=0.4456) | info on Rv0747/PE_PGRS10 |
| Rv1046c/- | (cc=0.4343) | info on Rv1046c/- |
Correlation of Rv3327/- with Rv2701c/suhB
Normalized LFCs for Rv3327/-:
(description and provenance of datasets)
| Rv3327/- | Rv2701c/suhB | |
| Fe_supp_jason_reseq | -1.02 | -1.904 |
| low_pH_jason_reseq | 0.432 | -1.004 |
| NO_jason_reseq | -0.118 | -0.163 |
| B6_jason_reseq | 0.114 | -0.536 |
| MHCII_jason_reseq | 0.012 | -0.453 |
| Isoniazid02 | -0.765 | 0.26 |
| Rifampicin4 | -0.799 | 0.322 |
| Ethambutol3 | -0.218 | 0.946 |
| Meropenem3 | 1.569 | 1.804 |
| Vancomycin16 | -0.592 | 0.34 |
| Rv2680_day32 | 0.044 | -0.475 |
| H37Rv_KO_MarP | 0.134 | -0.134 |
| hypoxia_3wks | 0.49 | -0.722 |
| hypoxia_6wks | 0.217 | -0.284 |
| glycerol | -0.307 | 0.325 |
| cholesterol | 1.415 | 1.235 |
| AJ | 0.407 | -0.141 |
| Bibs02 | 0.163 | 0.23 |
| Bibs02c | 0.158 | 0.105 |
| BL6 | 0.388 | 0.31 |
| BL6a | 0.149 | -0.433 |
| BXD01 | -0.025 | -1.354 |
| BXD010 | -0.247 | -0.149 |
| BXD011 | -0.103 | -0.959 |
| BXD03 | -0.261 | -0.57 |
| BXD04 | -0.16 | -0.37 |
| BXD05 | 0.437 | -0.727 |
| BXD06 | -0.346 | -0.571 |
| BXD07 | 0.147 | 0.14 |
| BXD08 | -0.32 | -0.65 |
| BXD09 | -0.313 | -0.816 |
| CAST | 0.672 | 0.499 |
| CCcont | -0.288 | -1.223 |
| DS01 | 0.123 | -0.448 |
| DS02 | 0.02 | -0.413 |
| DS04 | 0.274 | -0.176 |
| DS0c | 0.24 | -0.025 |
| GP01 | -0.214 | 1.237 |
| GP02 | 0.377 | 1.199 |
| GP0c | 0.555 | -0.222 |
| NOD | 0.159 | 0.493 |
| NZO | 0.264 | -0.577 |
| PWK | 0.344 | 0.475 |
| H37Rv_KO_CtpC | 0.069 | -1.403 |
| H37Rv_KO_CtpD | 0.012 | -1.06 |
| H37Rv_KO_Rv1272 | -0.168 | -1.481 |
| H37Rv_KO_SugABC | 0.732 | -0.441 |
| H37Rv_KO_MbtN | -0.327 | -0.927 |
| Trans05 | -0.458 | -0.236 |
| macrophage_unactivated | -0.391 | -1.979 |
| IL1 | -0.148 | -0.35 |
| Rapamycin | -0.132 | -0.193 |
| Tcell | -0.74 | -1.916 |
| GMCSF | -0.23 | -0.863 |
| IFNab | -0.738 | -1.128 |
| IFNg | -0.056 | 0.251 |
| IFNg_GMCSF1 | 0.066 | -0.405 |
| Rv1432_day32 | 0.821 | -0.639 |
| Rv1565c_day32 | 0.193 | -0.325 |
| secA2_input | -0.15 | 0.85 |
| delta_Rv3594 | -0.358 | -0.337 |
| delta_Rv3717 | 0.019 | 0.413 |
| delta_Rv3811 | -0.699 | -0.247 |
| delta_Rv0954 | -0.2 | -0.509 |
| PonA1 | 0.027 | 0.13 |
| EccD1_KO | 0.845 | 0.829 |
| EspI_KO | 0.519 | 1.446 |
| PE35_KO | 0.551 | 0.032 |
| PPE68_KO | 0.48 | -0.544 |
| glycerol2 | -0.025 | -0.75 |
| lignocerate | -0.399 | -1.076 |
| oleate | 0.242 | -0.298 |
| phosphatidylcholine | -0.067 | -0.926 |
| acetate | 0.048 | -1.709 |
| glucAc | -0.294 | -1.251 |
| Rv0950ko | -0.157 | 0.181 |
| Rv1096ko | 0.781 | 1.252 |
| Rv3684ko | 0.272 | 1.238 |
| delta_otsA_trehalose | 0.987 | 0.972 |