Top 10 genes with highest correlation to Rv3308/pmmB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3445c/esxU | (cc=0.4973) | info on Rv3445c/esxU |
| Rv0366c/- | (cc=0.4891) | info on Rv0366c/- |
| Rv0265c/- | (cc=0.4848) | info on Rv0265c/- |
| Rv2636/- | (cc=0.4789) | info on Rv2636/- |
| Rv3506/fadD17 | (cc=0.477) | info on Rv3506/fadD17 |
| Rv1442/bisC | (cc=0.472) | info on Rv1442/bisC |
| Rv0857/- | (cc=0.4692) | info on Rv0857/- |
| Rv0851c/- | (cc=0.4618) | info on Rv0851c/- |
| Rv3091/- | (cc=0.4434) | info on Rv3091/- |
| Rv0266c/oplA | (cc=0.4413) | info on Rv0266c/oplA |
Correlation of Rv3308/pmmB with Rv1442/bisC
Normalized LFCs for Rv3308/pmmB:
(description and provenance of datasets)
| Rv3308/pmmB | Rv1442/bisC | |
| Fe_supp_jason_reseq | -1.129 | 0.137 |
| low_pH_jason_reseq | -0.303 | -0.673 |
| NO_jason_reseq | -0.213 | -0.431 |
| B6_jason_reseq | 0.085 | 0.363 |
| MHCII_jason_reseq | 0.842 | 0.584 |
| Isoniazid02 | -0.797 | 0.316 |
| Rifampicin4 | -0.555 | 0.341 |
| Ethambutol3 | -0.454 | 0.253 |
| Meropenem3 | 0.587 | 0.391 |
| Vancomycin16 | -0.448 | 0.385 |
| Rv2680_day32 | -0.049 | 0.356 |
| H37Rv_KO_MarP | -0.329 | 0.028 |
| hypoxia_3wks | 0.191 | 0.0 |
| hypoxia_6wks | -0.213 | 0.299 |
| glycerol | -0.227 | 0.53 |
| cholesterol | -0.229 | 0.312 |
| AJ | 0.165 | 0.207 |
| Bibs02 | -0.346 | -0.158 |
| Bibs02c | 0.135 | 0.286 |
| BL6 | -0.501 | -0.101 |
| BL6a | -0.39 | -0.059 |
| BXD01 | -0.206 | -0.045 |
| BXD010 | -0.464 | -0.277 |
| BXD011 | -0.931 | -0.315 |
| BXD03 | -0.568 | -0.146 |
| BXD04 | -0.691 | 0.024 |
| BXD05 | -0.678 | -0.267 |
| BXD06 | -0.588 | -0.242 |
| BXD07 | -0.624 | -0.476 |
| BXD08 | -0.409 | -0.241 |
| BXD09 | -0.884 | -0.391 |
| CAST | -0.242 | -0.164 |
| CCcont | -0.643 | -0.09 |
| DS01 | -0.113 | 0.303 |
| DS02 | -0.26 | 0.336 |
| DS04 | 0.089 | 0.426 |
| DS0c | -0.891 | 0.561 |
| GP01 | 0.589 | 0.127 |
| GP02 | -1.469 | 0.572 |
| GP0c | -0.071 | -0.258 |
| NOD | 0.281 | 0.308 |
| NZO | -0.095 | -0.02 |
| PWK | -0.824 | -0.108 |
| H37Rv_KO_CtpC | -1.124 | -0.391 |
| H37Rv_KO_CtpD | -0.876 | 0.054 |
| H37Rv_KO_Rv1272 | -2.255 | -0.967 |
| H37Rv_KO_SugABC | 0.581 | 0.482 |
| H37Rv_KO_MbtN | -0.782 | 0.27 |
| Trans05 | -0.686 | -0.504 |
| macrophage_unactivated | -0.855 | 0.208 |
| IL1 | 0.389 | 0.448 |
| Rapamycin | -0.129 | 0.0 |
| Tcell | 0.345 | 0.342 |
| GMCSF | -0.38 | 0.438 |
| IFNab | -0.085 | 0.366 |
| IFNg | -0.187 | 0.302 |
| IFNg_GMCSF1 | 0.085 | 0.402 |
| Rv1432_day32 | -0.851 | 0.018 |
| Rv1565c_day32 | 0.449 | 0.742 |
| secA2_input | 1.605 | -0.528 |
| delta_Rv3594 | -1.302 | -0.434 |
| delta_Rv3717 | -1.291 | -0.077 |
| delta_Rv3811 | -0.455 | -0.391 |
| delta_Rv0954 | -0.141 | -0.261 |
| PonA1 | 0.226 | -0.113 |
| EccD1_KO | -0.286 | -0.158 |
| EspI_KO | -0.556 | -0.607 |
| PE35_KO | -0.21 | -0.111 |
| PPE68_KO | -0.278 | 0.0 |
| glycerol2 | 0.591 | 0.716 |
| lignocerate | 0.575 | 1.276 |
| oleate | 0.525 | 0.438 |
| phosphatidylcholine | 0.882 | 1.056 |
| acetate | 0.153 | 0.721 |
| glucAc | 0.041 | 0.793 |
| Rv0950ko | -0.305 | 0.054 |
| Rv1096ko | 1.221 | 0.347 |
| Rv3684ko | -0.196 | 0.0 |
| delta_otsA_trehalose | 0.942 | 0.348 |