Top 10 genes with highest correlation to Rv3301c/phoY1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2623/TB31.7 | (cc=0.5231) | info on Rv2623/TB31.7 |
| Rv2813/- | (cc=0.51) | info on Rv2813/- |
| Rv2544/lppB | (cc=0.5047) | info on Rv2544/lppB |
| Rv2960c/- | (cc=0.5033) | info on Rv2960c/- |
| Rv1987/- | (cc=0.4721) | info on Rv1987/- |
| Rv3045/adhC | (cc=0.4665) | info on Rv3045/adhC |
| Rv3010c/pfkA | (cc=0.4648) | info on Rv3010c/pfkA |
| Rv3133c/devR | (cc=0.4559) | info on Rv3133c/devR |
| Rv0945/- | (cc=0.454) | info on Rv0945/- |
| Rv2276/cyp121 | (cc=0.4518) | info on Rv2276/cyp121 |
Correlation of Rv3301c/phoY1 with Rv2623/TB31.7
Normalized LFCs for Rv3301c/phoY1:
(description and provenance of datasets)
| Rv3301c/phoY1 | Rv2623/TB31.7 | |
| Fe_supp_jason_reseq | 0.633 | 0.136 |
| low_pH_jason_reseq | -0.515 | -1.054 |
| NO_jason_reseq | 0.189 | 0.281 |
| B6_jason_reseq | -0.846 | -0.777 |
| MHCII_jason_reseq | 1.171 | 0.0 |
| Isoniazid02 | -0.781 | -0.297 |
| Rifampicin4 | -1.362 | -0.818 |
| Ethambutol3 | -0.741 | -0.728 |
| Meropenem3 | -0.521 | 4.781 |
| Vancomycin16 | -0.783 | -0.379 |
| Rv2680_day32 | -0.799 | -0.725 |
| H37Rv_KO_MarP | 0.04 | -0.071 |
| hypoxia_3wks | -3.369 | -4.191 |
| hypoxia_6wks | -2.648 | -4.074 |
| glycerol | -0.167 | -0.164 |
| cholesterol | -1.3 | -0.159 |
| AJ | -0.425 | -0.998 |
| Bibs02 | -0.539 | -0.256 |
| Bibs02c | 0.144 | 0.774 |
| BL6 | 1.166 | 0.847 |
| BL6a | 0.263 | 0.621 |
| BXD01 | 0.677 | -0.07 |
| BXD010 | 0.399 | -1.728 |
| BXD011 | 0.494 | -0.523 |
| BXD03 | 0.301 | 0.821 |
| BXD04 | -0.033 | -0.556 |
| BXD05 | -0.086 | -1.289 |
| BXD06 | 0.297 | -0.803 |
| BXD07 | 0.562 | -0.392 |
| BXD08 | 0.602 | -0.546 |
| BXD09 | 0.429 | -0.398 |
| CAST | 0.12 | -0.062 |
| CCcont | 0.633 | 0.235 |
| DS01 | 0.041 | -0.4 |
| DS02 | -1.186 | -0.336 |
| DS04 | 0.417 | -1.166 |
| DS0c | 0.149 | -0.303 |
| GP01 | -1.522 | -1.727 |
| GP02 | -0.898 | -0.208 |
| GP0c | 0.27 | -0.413 |
| NOD | 0.516 | 1.01 |
| NZO | -0.224 | -0.6 |
| PWK | -0.487 | -0.844 |
| H37Rv_KO_CtpC | 0.698 | 0.181 |
| H37Rv_KO_CtpD | -0.71 | -0.52 |
| H37Rv_KO_Rv1272 | 0.476 | -0.329 |
| H37Rv_KO_SugABC | 1.505 | -2.054 |
| H37Rv_KO_MbtN | 0.399 | -0.208 |
| Trans05 | -0.325 | 0.642 |
| macrophage_unactivated | -0.436 | -0.925 |
| IL1 | -0.457 | -0.762 |
| Rapamycin | 0.74 | -0.092 |
| Tcell | 0.746 | -0.955 |
| GMCSF | 0.0 | 0.153 |
| IFNab | 0.692 | -0.469 |
| IFNg | 0.612 | -0.879 |
| IFNg_GMCSF1 | 0.984 | 0.0 |
| Rv1432_day32 | 0.073 | 2.115 |
| Rv1565c_day32 | 1.264 | 0.218 |
| secA2_input | -0.454 | 0.495 |
| delta_Rv3594 | 0.26 | 0.24 |
| delta_Rv3717 | -0.216 | 0.029 |
| delta_Rv3811 | 0.229 | 0.5 |
| delta_Rv0954 | 1.689 | 0.061 |
| PonA1 | -0.223 | 0.553 |
| EccD1_KO | 1.246 | 2.319 |
| EspI_KO | 0.633 | 0.953 |
| PE35_KO | 0.648 | 2.535 |
| PPE68_KO | 0.486 | 1.597 |
| glycerol2 | 0.736 | 1.195 |
| lignocerate | 1.136 | 2.075 |
| oleate | 0.469 | -1.626 |
| phosphatidylcholine | 0.958 | 1.401 |
| acetate | 1.589 | 2.244 |
| glucAc | 1.487 | 2.361 |
| Rv0950ko | -0.543 | -1.224 |
| Rv1096ko | 0.154 | -1.279 |
| Rv3684ko | -1.431 | -1.565 |
| delta_otsA_trehalose | -1.061 | -0.429 |