Top 10 genes with highest correlation to Rv3300c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3397c/phyA | (cc=0.6029) | info on Rv3397c/phyA |
| Rv3126c/- | (cc=0.5772) | info on Rv3126c/- |
| Rv2243/fabD | (cc=0.5759) | info on Rv2243/fabD |
| Rv3153/nuoI | (cc=0.558) | info on Rv3153/nuoI |
| Rv0805/- | (cc=0.5487) | info on Rv0805/- |
| Rv2816c/- | (cc=0.5402) | info on Rv2816c/- |
| Rv3529c/- | (cc=0.5246) | info on Rv3529c/- |
| Rv3146/nuoB | (cc=0.5237) | info on Rv3146/nuoB |
| Rv0940c/- | (cc=0.5212) | info on Rv0940c/- |
| Rv0928/pstS3 | (cc=0.5206) | info on Rv0928/pstS3 |
Correlation of Rv3300c/- with Rv3146/nuoB
Normalized LFCs for Rv3300c/-:
(description and provenance of datasets)
| Rv3300c/- | Rv3146/nuoB | |
| Fe_supp_jason_reseq | -0.766 | -1.318 |
| low_pH_jason_reseq | -0.811 | -0.895 |
| NO_jason_reseq | -0.882 | -0.63 |
| B6_jason_reseq | -0.723 | -2.02 |
| MHCII_jason_reseq | -0.328 | -2.204 |
| Isoniazid02 | -1.192 | -0.303 |
| Rifampicin4 | -1.124 | 0.533 |
| Ethambutol3 | -1.131 | 1.094 |
| Meropenem3 | -0.907 | -0.944 |
| Vancomycin16 | -1.366 | 0.0 |
| Rv2680_day32 | 1.906 | 2.143 |
| H37Rv_KO_MarP | -0.317 | -0.08 |
| hypoxia_3wks | 0.255 | 1.228 |
| hypoxia_6wks | -0.572 | 0.528 |
| glycerol | 0.176 | 0.669 |
| cholesterol | -0.597 | 0.246 |
| AJ | -0.108 | -0.913 |
| Bibs02 | -0.694 | -2.215 |
| Bibs02c | 0.721 | -0.887 |
| BL6 | 2.159 | 2.686 |
| BL6a | 1.221 | 3.008 |
| BXD01 | 2.32 | 3.298 |
| BXD010 | -0.09 | 3.288 |
| BXD011 | 1.403 | 2.568 |
| BXD03 | 0.817 | 2.99 |
| BXD04 | 1.777 | 2.919 |
| BXD05 | 1.252 | 3.2 |
| BXD06 | 1.831 | 2.98 |
| BXD07 | 2.284 | 3.309 |
| BXD08 | 1.261 | 3.323 |
| BXD09 | 1.581 | 3.314 |
| CAST | 0.43 | 0.829 |
| CCcont | 1.573 | 1.842 |
| DS01 | 0.053 | -0.202 |
| DS02 | 0.189 | -0.285 |
| DS04 | 1.018 | 0.727 |
| DS0c | -0.05 | 0.443 |
| GP01 | -0.069 | 1.199 |
| GP02 | 0.936 | 0.444 |
| GP0c | 0.551 | 2.314 |
| NOD | 0.42 | 0.381 |
| NZO | 1.533 | 0.118 |
| PWK | 0.645 | 0.155 |
| H37Rv_KO_CtpC | 0.479 | 2.112 |
| H37Rv_KO_CtpD | -0.807 | 3.386 |
| H37Rv_KO_Rv1272 | 0.0 | 2.5 |
| H37Rv_KO_SugABC | 0.52 | 2.905 |
| H37Rv_KO_MbtN | 0.355 | 3.496 |
| Trans05 | -0.225 | 1.803 |
| macrophage_unactivated | 0.0 | -0.196 |
| IL1 | -0.314 | -0.32 |
| Rapamycin | 0.23 | -0.454 |
| Tcell | 1.268 | -0.202 |
| GMCSF | -0.428 | -0.536 |
| IFNab | -0.532 | 1.288 |
| IFNg | -1.098 | -0.016 |
| IFNg_GMCSF1 | -0.836 | -0.487 |
| Rv1432_day32 | 0.173 | -0.314 |
| Rv1565c_day32 | -0.573 | -0.058 |
| secA2_input | -1.024 | -1.083 |
| delta_Rv3594 | -0.858 | 0.268 |
| delta_Rv3717 | -0.508 | 0.409 |
| delta_Rv3811 | -0.732 | -0.44 |
| delta_Rv0954 | -0.39 | 0.735 |
| PonA1 | -0.095 | 0.202 |
| EccD1_KO | 1.168 | -0.783 |
| EspI_KO | 1.646 | 0.137 |
| PE35_KO | 0.755 | 0.0 |
| PPE68_KO | 0.953 | 0.301 |
| glycerol2 | 0.158 | 2.655 |
| lignocerate | 0.424 | -0.298 |
| oleate | 0.373 | 3.194 |
| phosphatidylcholine | 0.487 | -0.199 |
| acetate | -0.204 | 0.037 |
| glucAc | -0.069 | 0.62 |
| Rv0950ko | -0.292 | 1.236 |
| Rv1096ko | 0.531 | 1.318 |
| Rv3684ko | 1.729 | 0.491 |
| delta_otsA_trehalose | -0.67 | 0.503 |