Top 10 genes with highest correlation to Rv3300c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3397c/phyA | (cc=0.6029) | info on Rv3397c/phyA |
| Rv3126c/- | (cc=0.5772) | info on Rv3126c/- |
| Rv2243/fabD | (cc=0.5759) | info on Rv2243/fabD |
| Rv3153/nuoI | (cc=0.558) | info on Rv3153/nuoI |
| Rv0805/- | (cc=0.5487) | info on Rv0805/- |
| Rv2816c/- | (cc=0.5402) | info on Rv2816c/- |
| Rv3529c/- | (cc=0.5246) | info on Rv3529c/- |
| Rv3146/nuoB | (cc=0.5237) | info on Rv3146/nuoB |
| Rv0940c/- | (cc=0.5212) | info on Rv0940c/- |
| Rv0928/pstS3 | (cc=0.5206) | info on Rv0928/pstS3 |
Correlation of Rv3300c/- with Rv2816c/-
Normalized LFCs for Rv3300c/-:
(description and provenance of datasets)
| Rv3300c/- | Rv2816c/- | |
| Fe_supp_jason_reseq | -0.766 | 1.156 |
| low_pH_jason_reseq | -0.811 | -0.803 |
| NO_jason_reseq | -0.882 | -0.221 |
| B6_jason_reseq | -0.723 | 0.577 |
| MHCII_jason_reseq | -0.328 | 0.527 |
| Isoniazid02 | -1.192 | -0.563 |
| Rifampicin4 | -1.124 | -0.902 |
| Ethambutol3 | -1.131 | 1.025 |
| Meropenem3 | -0.907 | 0.365 |
| Vancomycin16 | -1.366 | 0.111 |
| Rv2680_day32 | 1.906 | 2.122 |
| H37Rv_KO_MarP | -0.317 | -0.559 |
| hypoxia_3wks | 0.255 | 0.215 |
| hypoxia_6wks | -0.572 | -0.088 |
| glycerol | 0.176 | 0.464 |
| cholesterol | -0.597 | -0.782 |
| AJ | -0.108 | 0.698 |
| Bibs02 | -0.694 | 0.624 |
| Bibs02c | 0.721 | -1.634 |
| BL6 | 2.159 | 1.525 |
| BL6a | 1.221 | 1.416 |
| BXD01 | 2.32 | 1.344 |
| BXD010 | -0.09 | 0.437 |
| BXD011 | 1.403 | 1.224 |
| BXD03 | 0.817 | 1.836 |
| BXD04 | 1.777 | 1.171 |
| BXD05 | 1.252 | 1.46 |
| BXD06 | 1.831 | 1.244 |
| BXD07 | 2.284 | 1.259 |
| BXD08 | 1.261 | 1.209 |
| BXD09 | 1.581 | 1.309 |
| CAST | 0.43 | -0.13 |
| CCcont | 1.573 | 1.162 |
| DS01 | 0.053 | 0.506 |
| DS02 | 0.189 | 0.079 |
| DS04 | 1.018 | -0.306 |
| DS0c | -0.05 | 0.985 |
| GP01 | -0.069 | 0.053 |
| GP02 | 0.936 | 0.64 |
| GP0c | 0.551 | 0.427 |
| NOD | 0.42 | 3.461 |
| NZO | 1.533 | 1.172 |
| PWK | 0.645 | -0.149 |
| H37Rv_KO_CtpC | 0.479 | 0.885 |
| H37Rv_KO_CtpD | -0.807 | -0.807 |
| H37Rv_KO_Rv1272 | 0.0 | 0.983 |
| H37Rv_KO_SugABC | 0.52 | 2.137 |
| H37Rv_KO_MbtN | 0.355 | 0.492 |
| Trans05 | -0.225 | 1.366 |
| macrophage_unactivated | 0.0 | -0.142 |
| IL1 | -0.314 | -0.273 |
| Rapamycin | 0.23 | -0.786 |
| Tcell | 1.268 | -0.111 |
| GMCSF | -0.428 | 0.058 |
| IFNab | -0.532 | -0.898 |
| IFNg | -1.098 | -0.12 |
| IFNg_GMCSF1 | -0.836 | -1.291 |
| Rv1432_day32 | 0.173 | 0.0 |
| Rv1565c_day32 | -0.573 | -0.6 |
| secA2_input | -1.024 | -2.336 |
| delta_Rv3594 | -0.858 | -0.575 |
| delta_Rv3717 | -0.508 | -0.703 |
| delta_Rv3811 | -0.732 | -0.802 |
| delta_Rv0954 | -0.39 | -1.176 |
| PonA1 | -0.095 | -0.913 |
| EccD1_KO | 1.168 | -0.066 |
| EspI_KO | 1.646 | 0.422 |
| PE35_KO | 0.755 | 0.823 |
| PPE68_KO | 0.953 | 1.389 |
| glycerol2 | 0.158 | 0.684 |
| lignocerate | 0.424 | 0.367 |
| oleate | 0.373 | 0.213 |
| phosphatidylcholine | 0.487 | 0.538 |
| acetate | -0.204 | 0.638 |
| glucAc | -0.069 | 0.369 |
| Rv0950ko | -0.292 | -0.172 |
| Rv1096ko | 0.531 | -0.425 |
| Rv3684ko | 1.729 | -0.036 |
| delta_otsA_trehalose | -0.67 | -0.409 |