Top 10 genes with highest correlation to Rv3294c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0144/- | (cc=0.5785) | info on Rv0144/- |
| Rv1989c/- | (cc=0.5534) | info on Rv1989c/- |
| Rv1882c/- | (cc=0.5444) | info on Rv1882c/- |
| Rv0764c/cyp51 | (cc=0.5366) | info on Rv0764c/cyp51 |
| Rv2066/cobI | (cc=0.5356) | info on Rv2066/cobI |
| Rv2025c/- | (cc=0.5326) | info on Rv2025c/- |
| Rv0233/nrdB | (cc=0.5247) | info on Rv0233/nrdB |
| Rv3435c/- | (cc=0.5243) | info on Rv3435c/- |
| Rv3554/fdxB | (cc=0.5217) | info on Rv3554/fdxB |
| Rv0560c/- | (cc=0.5215) | info on Rv0560c/- |
Correlation of Rv3294c/- with Rv2025c/-
Normalized LFCs for Rv3294c/-:
(description and provenance of datasets)
| Rv3294c/- | Rv2025c/- | |
| Fe_supp_jason_reseq | 0.213 | 0.385 |
| low_pH_jason_reseq | 0.11 | -0.905 |
| NO_jason_reseq | -0.446 | -0.541 |
| B6_jason_reseq | 0.424 | 0.798 |
| MHCII_jason_reseq | 0.795 | 0.771 |
| Isoniazid02 | -0.179 | 0.111 |
| Rifampicin4 | -0.366 | 0.187 |
| Ethambutol3 | -0.288 | 0.124 |
| Meropenem3 | 0.437 | 1.12 |
| Vancomycin16 | -0.424 | -0.133 |
| Rv2680_day32 | -0.202 | -0.651 |
| H37Rv_KO_MarP | -0.038 | -0.782 |
| hypoxia_3wks | -0.024 | -0.395 |
| hypoxia_6wks | -0.111 | -0.668 |
| glycerol | -0.984 | -2.171 |
| cholesterol | -0.209 | -1.698 |
| AJ | 0.21 | 0.583 |
| Bibs02 | 0.454 | -0.309 |
| Bibs02c | 0.409 | 0.286 |
| BL6 | -0.772 | -0.798 |
| BL6a | -0.043 | -0.301 |
| BXD01 | -0.343 | -0.641 |
| BXD010 | -0.437 | -0.67 |
| BXD011 | -0.255 | -0.824 |
| BXD03 | -0.189 | -0.51 |
| BXD04 | -0.506 | -0.409 |
| BXD05 | -0.128 | -0.882 |
| BXD06 | -0.416 | -1.093 |
| BXD07 | -0.538 | -1.332 |
| BXD08 | -0.209 | -0.726 |
| BXD09 | -0.162 | -0.78 |
| CAST | 0.307 | 0.022 |
| CCcont | -0.627 | -0.658 |
| DS01 | 0.33 | 0.645 |
| DS02 | 0.457 | 0.555 |
| DS04 | 0.156 | -0.52 |
| DS0c | 1.004 | -0.295 |
| GP01 | 0.775 | 1.838 |
| GP02 | 0.497 | 1.966 |
| GP0c | 0.144 | 0.729 |
| NOD | 0.955 | 0.605 |
| NZO | 0.507 | 0.652 |
| PWK | 0.453 | 0.706 |
| H37Rv_KO_CtpC | -0.154 | -0.887 |
| H37Rv_KO_CtpD | 0.076 | 0.082 |
| H37Rv_KO_Rv1272 | 0.663 | -0.888 |
| H37Rv_KO_SugABC | -0.138 | -1.35 |
| H37Rv_KO_MbtN | 0.211 | 0.691 |
| Trans05 | 0.207 | -0.057 |
| macrophage_unactivated | -0.3 | -0.584 |
| IL1 | 0.163 | -1.299 |
| Rapamycin | -0.064 | -0.703 |
| Tcell | -0.212 | -0.893 |
| GMCSF | -0.037 | -0.378 |
| IFNab | -0.172 | -0.26 |
| IFNg | -0.374 | -0.404 |
| IFNg_GMCSF1 | 0.421 | -0.17 |
| Rv1432_day32 | 0.595 | -0.299 |
| Rv1565c_day32 | 0.24 | -0.316 |
| secA2_input | -0.538 | -0.664 |
| delta_Rv3594 | 0.07 | -0.71 |
| delta_Rv3717 | 0.185 | -0.54 |
| delta_Rv3811 | -0.024 | -0.15 |
| delta_Rv0954 | 0.243 | -0.733 |
| PonA1 | 0.248 | -0.881 |
| EccD1_KO | -0.214 | -0.993 |
| EspI_KO | -0.319 | -0.285 |
| PE35_KO | -0.426 | 0.137 |
| PPE68_KO | -0.653 | 0.128 |
| glycerol2 | 0.321 | 0.772 |
| lignocerate | 0.1 | 0.276 |
| oleate | 0.077 | 0.696 |
| phosphatidylcholine | 0.35 | 0.427 |
| acetate | -0.166 | -0.482 |
| glucAc | -0.252 | -0.447 |
| Rv0950ko | 0.513 | 0.41 |
| Rv1096ko | 0.531 | -0.175 |
| Rv3684ko | 0.537 | 1.081 |
| delta_otsA_trehalose | 1.61 | -0.25 |