Top 10 genes with highest correlation to Rv3294c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0144/- | (cc=0.5785) | info on Rv0144/- |
| Rv1989c/- | (cc=0.5534) | info on Rv1989c/- |
| Rv1882c/- | (cc=0.5444) | info on Rv1882c/- |
| Rv0764c/cyp51 | (cc=0.5366) | info on Rv0764c/cyp51 |
| Rv2066/cobI | (cc=0.5356) | info on Rv2066/cobI |
| Rv2025c/- | (cc=0.5326) | info on Rv2025c/- |
| Rv0233/nrdB | (cc=0.5247) | info on Rv0233/nrdB |
| Rv3435c/- | (cc=0.5243) | info on Rv3435c/- |
| Rv3554/fdxB | (cc=0.5217) | info on Rv3554/fdxB |
| Rv0560c/- | (cc=0.5215) | info on Rv0560c/- |
Correlation of Rv3294c/- with Rv1989c/-
Normalized LFCs for Rv3294c/-:
(description and provenance of datasets)
| Rv3294c/- | Rv1989c/- | |
| Fe_supp_jason_reseq | 0.213 | -0.633 |
| low_pH_jason_reseq | 0.11 | -0.243 |
| NO_jason_reseq | -0.446 | 0.446 |
| B6_jason_reseq | 0.424 | 0.514 |
| MHCII_jason_reseq | 0.795 | 0.217 |
| Isoniazid02 | -0.179 | 0.499 |
| Rifampicin4 | -0.366 | -0.915 |
| Ethambutol3 | -0.288 | 0.931 |
| Meropenem3 | 0.437 | -0.738 |
| Vancomycin16 | -0.424 | -0.26 |
| Rv2680_day32 | -0.202 | 0.615 |
| H37Rv_KO_MarP | -0.038 | 0.049 |
| hypoxia_3wks | -0.024 | -0.187 |
| hypoxia_6wks | -0.111 | -0.221 |
| glycerol | -0.984 | -1.791 |
| cholesterol | -0.209 | -0.893 |
| AJ | 0.21 | -0.034 |
| Bibs02 | 0.454 | 0.442 |
| Bibs02c | 0.409 | 0.138 |
| BL6 | -0.772 | -1.171 |
| BL6a | -0.043 | -0.36 |
| BXD01 | -0.343 | -0.451 |
| BXD010 | -0.437 | -1.432 |
| BXD011 | -0.255 | -0.947 |
| BXD03 | -0.189 | -0.586 |
| BXD04 | -0.506 | -0.24 |
| BXD05 | -0.128 | -0.529 |
| BXD06 | -0.416 | -1.085 |
| BXD07 | -0.538 | -0.764 |
| BXD08 | -0.209 | -0.912 |
| BXD09 | -0.162 | -0.975 |
| CAST | 0.307 | -0.087 |
| CCcont | -0.627 | -1.18 |
| DS01 | 0.33 | -0.05 |
| DS02 | 0.457 | 0.314 |
| DS04 | 0.156 | 0.008 |
| DS0c | 1.004 | -0.041 |
| GP01 | 0.775 | 0.022 |
| GP02 | 0.497 | 1.252 |
| GP0c | 0.144 | -0.335 |
| NOD | 0.955 | 0.221 |
| NZO | 0.507 | -0.452 |
| PWK | 0.453 | -0.121 |
| H37Rv_KO_CtpC | -0.154 | -0.824 |
| H37Rv_KO_CtpD | 0.076 | -0.613 |
| H37Rv_KO_Rv1272 | 0.663 | 0.126 |
| H37Rv_KO_SugABC | -0.138 | -0.039 |
| H37Rv_KO_MbtN | 0.211 | 0.025 |
| Trans05 | 0.207 | 0.533 |
| macrophage_unactivated | -0.3 | -0.546 |
| IL1 | 0.163 | -1.056 |
| Rapamycin | -0.064 | -1.114 |
| Tcell | -0.212 | -0.564 |
| GMCSF | -0.037 | -0.826 |
| IFNab | -0.172 | -0.602 |
| IFNg | -0.374 | 0.219 |
| IFNg_GMCSF1 | 0.421 | 0.053 |
| Rv1432_day32 | 0.595 | 0.493 |
| Rv1565c_day32 | 0.24 | 0.548 |
| secA2_input | -0.538 | -0.888 |
| delta_Rv3594 | 0.07 | 0.85 |
| delta_Rv3717 | 0.185 | 0.337 |
| delta_Rv3811 | -0.024 | 0.573 |
| delta_Rv0954 | 0.243 | 0.417 |
| PonA1 | 0.248 | 0.083 |
| EccD1_KO | -0.214 | 0.661 |
| EspI_KO | -0.319 | -0.114 |
| PE35_KO | -0.426 | 0.248 |
| PPE68_KO | -0.653 | -0.128 |
| glycerol2 | 0.321 | 0.083 |
| lignocerate | 0.1 | 0.153 |
| oleate | 0.077 | 0.349 |
| phosphatidylcholine | 0.35 | 0.218 |
| acetate | -0.166 | -0.472 |
| glucAc | -0.252 | -0.616 |
| Rv0950ko | 0.513 | 0.28 |
| Rv1096ko | 0.531 | 0.057 |
| Rv3684ko | 0.537 | -0.377 |
| delta_otsA_trehalose | 1.61 | 1.837 |